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gnu: bowtie1: Update to 1.3.0.

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* gnu/packages/bioinformatics.scm (bowtie1): Update to 1.3.0.
[arguments]: Set CC in make flags.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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Mădălin Ionel Patrașcu 2021-02-11 22:03:29 +01:00 • committed by Ricardo Wurmus
parent 175bea0ca4
commit 160e4a95e7
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1 changed files with 4 additions and 4 deletions
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gnu/packages/bioinformatics.scm
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@ -1654,14 +1654,14 @@ gapped, local, and paired-end alignment modes.")
(define-public bowtie1 (define-public bowtie1
(package (package
(name "bowtie1") (name "bowtie1")
(version "1.2.3") (version "1.3.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://sourceforge/bowtie-bio/bowtie/" (uri (string-append "mirror://sourceforge/bowtie-bio/bowtie/"
version "/bowtie-src-x86_64.zip")) version "/bowtie-" version "-src.zip"))
(sha256 (sha256
(base32 (base32
"0vmiqdhc9dzyfy9sh6vgi7k9xy2hiw8g87vbamnc6cgpm179zsa4")) "11dbihdnrizc6qhx9xsw77w3q5ssx642alaqzvhxx32ak9glvq04"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
'(substitute* "Makefile" '(substitute* "Makefile"
@ -1672,7 +1672,7 @@ gapped, local, and paired-end alignment modes.")
(arguments (arguments
'(#:tests? #f ; no "check" target '(#:tests? #f ; no "check" target
#:make-flags #:make-flags
(list "all" (list "CC=gcc" "all"
(string-append "prefix=" (assoc-ref %outputs "out"))) (string-append "prefix=" (assoc-ref %outputs "out")))
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases