gnu: Add r-rnaagecalc.

* gnu/packages/bioconductor.scm (r-rnaagecalc): New variable.

Change-Id: I7f03b886ce188d9393d7419b616cd96f3f8b8421
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Ricardo Wurmus 2025-03-21 10:10:37 +01:00
parent 0b57a4e27e
commit 16ed9a2833
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@ -12168,6 +12168,38 @@ the available RAM.")
HDF5 datasets.")
(license license:bsd-2)))
(define-public r-rnaagecalc
(package
(name "r-rnaagecalc")
(version "1.18.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "RNAAgeCalc" version))
(sha256
(base32 "1f4vvx56jfs3ag0z1d815ysg54ff5p5l13cqq2gl9xfq2glqv6qn"))))
(properties `((upstream-name . "RNAAgeCalc")))
(build-system r-build-system)
(propagated-inputs (list r-annotationdbi
r-ggplot2
r-impute
r-org-hs-eg-db
r-recount
r-summarizedexperiment))
(native-inputs (list r-knitr r-testthat))
(home-page "https://github.com/reese3928/RNAAgeCalc")
(synopsis "Multi-tissue transcriptional age calculator")
(description
"It has been shown that both DNA methylation and RNA transcription are
linked to chronological age and age related diseases. Several estimators have
been developed to predict human aging from DNA level and RNA level. Most of
the human transcriptional age predictor are based on microarray data and
limited to only a few tissues. To date, transcriptional studies on aging
using RNASeq data from different human tissues is limited. The aim of this
package is to provide a tool for across-tissue and tissue-specific
transcriptional age calculation based on GTEx RNASeq data.")
(license license:gpl2)))
(define-public r-rsamtools
(package
(name "r-rsamtools")