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gnu: salmon: Use older version of TBB.

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* gnu/packages/bioinformatics.scm (salmon)[arguments]: Define
HAVE_NUMERIC_LIMITS128; compute TBB_VERSION.
[inputs]: Replace tbb with tbb-for-salmon.
This commit is contained in:
Ricardo Wurmus 2021-10-18 20:51:00 +00:00
parent 0ceb01a1ed
commit 174c29a8e0
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GPG key ID: 197A5888235FACAC
1 changed files with 3 additions and 2 deletions
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gnu/packages/bioinformatics.scm
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@ -9726,9 +9726,10 @@ The following file formats are supported:
`(#:configure-flags `(#:configure-flags
(list (string-append "-Dlibgff_DIR=" (list (string-append "-Dlibgff_DIR="
(assoc-ref %build-inputs "libgff") "/lib") (assoc-ref %build-inputs "libgff") "/lib")
"-DCMAKE_CXX_FLAGS=\"-DHAVE_NUMERIC_LIMITS128=1\""
"-Dlibgff_FOUND=TRUE" "-Dlibgff_FOUND=TRUE"
"-DTBB_FOUND=TRUE" "-DTBB_FOUND=TRUE"
"-DTBB_VERSION=2020.3" ,(string-append "-DTBB_VERSION=" (package-version tbb-for-salmon))
"-DTBB_LIBRARIES=tbb -ltbbmalloc" "-DTBB_LIBRARIES=tbb -ltbbmalloc"
"-DFETCHED_PUFFERFISH=TRUE" "-DFETCHED_PUFFERFISH=TRUE"
"-DUSE_SHARED_LIBS=TRUE") "-DUSE_SHARED_LIBS=TRUE")
@ -9822,7 +9823,7 @@ The following file formats are supported:
(sha256 (sha256
(base32 (base32
"0qb4a2nl1d59qasr17sslgxnkjd5kbk5mns4cjshrmsvkrqp995n")))) "0qb4a2nl1d59qasr17sslgxnkjd5kbk5mns4cjshrmsvkrqp995n"))))
("tbb" ,tbb) ("tbb" ,tbb-for-salmon)
("libstadenio-for-salmon" ,libstadenio-for-salmon) ("libstadenio-for-salmon" ,libstadenio-for-salmon)
("xz" ,xz) ("xz" ,xz)
("zlib" ,zlib))) ("zlib" ,zlib)))