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gnu: Add python-nibabel.

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* gnu/packages/python-science.scm (python-nibabel): New variable.

Change-Id: I27d3841def6f360ae3996aacb787142bcfa92291
Signed-off-by: Andreas Enge <andreas@enge.fr>
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Vinicius Monego 2025-02-09 01:52:20 +00:00 • committed by Andreas Enge
parent 69cbb0dd25
commit 19f092e8e8
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@ -9,7 +9,7 @@
;;; Copyright © 2019, 2021, 2022, 2023, 2024 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020, 2021, 2022, 2023, 2024 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2020-2025 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2021 Greg Hogan <code@greghogan.com>
;;; Copyright © 2021 Roel Janssen <roel@gnu.org>
;;; Copyright © 2021 Paul Garlick <pgarlick@tourbillion-technology.com>
@ -1128,6 +1128,39 @@ density maps, both for interactive and non-interactive use.")
Evapotranspiration using various standard methods.")
(license license:expat)))
(define-public python-nibabel
(package
(name "python-nibabel")
(version "5.3.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nibabel" version))
(sha256
(base32 "16snprwgp7qzp51j3mx0zdn7brvx6r14ankldi24ny0w7d8adp0b"))))
(build-system pyproject-build-system)
(arguments
(list
;; AttributeError: 'dict' object has no attribute 'add'.
#:test-flags #~(list "-k" "not test_first and not test_second")))
(propagated-inputs (list python-importlib-resources python-numpy
python-packaging python-typing-extensions))
(native-inputs (list python-hatch-vcs
python-hatchling
python-pytest
python-pytest-httpserver
python-pytest-xdist))
(home-page "https://nipy.org/nibabel/")
(synopsis "Read and write access to common neuroimaging file formats")
(description
"@code{nibabel} is a library that provides read and write access to
common neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2
and later), GIFTI, NIfTI1, NIfTI2, CIFTI-2, MINC1, MINC2, AFNI BRIK/HEAD,
ECAT and Philips PAR/REC. In addition, NiBabel also supports FreeSurfer’s
MGH, geometry, annotation and morphometry files, and provides some limited
support for DICOM.")
(license license:expat))) ; and other non-copyleft licenses
(define-public python-tspex
(package
(name "python-tspex")