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gnu: r-gqtlbase: Disable tests.
* gnu/packages/bioconductor.scm (r-gqtlbase)[arguments]: Disable tests; remove trailing #T from 'fix-imports phase. [native-inputs]: Add r-runit. Change-Id: Ic05a67edccfb5eebe312811d461d65bc49929ec9
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1 changed files with 7 additions and 5 deletions
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@ -24458,15 +24458,17 @@ interval to data view, mismatch pileup, and several splicing summaries.")
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(properties `((upstream-name . "gQTLBase")))
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(properties `((upstream-name . "gQTLBase")))
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(build-system r-build-system)
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(build-system r-build-system)
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(arguments
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(arguments
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`(#:phases
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(list
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(modify-phases %standard-phases
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;; Tests fail with "The file does not exist".
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#:tests? #false
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#:phases
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'(modify-phases %standard-phases
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;; This is an upstream bug.
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;; This is an upstream bug.
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(add-after 'unpack 'fix-imports
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(add-after 'unpack 'fix-imports
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(lambda _
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(lambda _
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(substitute* "NAMESPACE"
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(substitute* "NAMESPACE"
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((".*maxffmode.*") "")
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((".*maxffmode.*") "")
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(("importFrom\\(ff,.*") "import(ff)\n"))
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(("importFrom\\(ff,.*") "import(ff)\n")))))))
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#t)))))
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(propagated-inputs
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(propagated-inputs
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(list r-batchjobs
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(list r-batchjobs
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r-bbmisc
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r-bbmisc
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@ -24482,7 +24484,7 @@ interval to data view, mismatch pileup, and several splicing summaries.")
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r-s4vectors
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r-s4vectors
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r-summarizedexperiment))
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r-summarizedexperiment))
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(native-inputs
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(native-inputs
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(list r-knitr))
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(list r-knitr r-runit))
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(home-page "https://bioconductor.org/packages/gQTLBase")
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(home-page "https://bioconductor.org/packages/gQTLBase")
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(synopsis "Infrastructure for eQTL, mQTL and similar studies")
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(synopsis "Infrastructure for eQTL, mQTL and similar studies")
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(description
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(description
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