Merge branch 'master' into gnome-team

This commit is contained in:
Liliana Marie Prikler 2024-03-02 12:22:34 +01:00
commit 25c14c893f
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95 changed files with 112170 additions and 136339 deletions

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@ -14,7 +14,7 @@
;;; Copyright © 2015, 2016, 2017, 2019, 2022 Leo Famulari <leo@famulari.name>
;;; Copyright © 2015, 2017 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2015, 2016 Erik Edrosa <erik.edrosa@gmail.com>
;;; Copyright © 2015-2023 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015-2024 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015, 2017, 2020 Kyle Meyer <kyle@kyleam.com>
;;; Copyright © 2015, 2016 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
@ -29,7 +29,7 @@
;;; Copyright © 2016-2023 Marius Bakke <marius@gnu.org>
;;; Copyright © 2016, 2017, 2021, 2022 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2016, 2017, 2019 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 20162018, 20212023 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 20162018, 20212024 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016, 2017, 2018, 2020, 2021 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 20162022 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2016, 2017 Thomas Danckaert <post@thomasdanckaert.be>
@ -181,6 +181,7 @@
#:use-module (gnu packages compression)
#:use-module (gnu packages cpp)
#:use-module (gnu packages crates-io)
#:use-module (gnu packages crates-windows)
#:use-module (gnu packages crypto)
#:use-module (gnu packages databases)
#:use-module (gnu packages dbm)
@ -579,7 +580,13 @@ workspaces.
(method url-fetch)
(uri (pypi-uri "databind.core" version))
(sha256
(base32 "130hr19kbzizx9n2q7cwfzfk20ii3cqmqjrzb16psnafll303k2d"))))
(base32 "130hr19kbzizx9n2q7cwfzfk20ii3cqmqjrzb16psnafll303k2d"))
(snippet
#~(begin (use-modules (guix build utils))
;; The problem with python-typing-extensions >= 4.7 is only
;; with python-3.7.
(substitute* "pyproject.toml"
((",<4.7.*") "\"\n"))))))
(build-system pyproject-build-system)
(arguments
(list
@ -624,7 +631,13 @@ Python dataclasses.")
(method url-fetch)
(uri (pypi-uri "databind.json" version))
(sha256
(base32 "1lm864d7arfq0pw64hyc83bwn1z94wjg7a22q1xf0qkjynqs70gg"))))
(base32 "1lm864d7arfq0pw64hyc83bwn1z94wjg7a22q1xf0qkjynqs70gg"))
(snippet
#~(begin (use-modules (guix build utils))
;; The problem with python-typing-extensions >= 4.7 is only
;; with python-3.7.
(substitute* "pyproject.toml"
((",<4.7.*") "\"\n"))))))
(build-system pyproject-build-system)
(arguments
(list
@ -1103,19 +1116,29 @@ during long operations.")
(define-public python-lunr
(package
(name "python-lunr")
(version "0.6.0")
(version "0.7.0.post1")
(source
(origin
(method url-fetch)
(uri
(pypi-uri "lunr" version))
(sha256
(base32 "106akalywfmnypzkdrhgz4n4740a8xayspybsw59kq06vz8i2qrc"))))
(build-system python-build-system)
(base32 "1njb23lw619ppidqdzygdrscna4z15n9xjc4cc7yxiskkgsriz00"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k" "not TestLanguageSupport"
"--ignore-glob=tests/acceptance_tests/*")))
(native-inputs
(list python-mock python-pytest))
(list python-coverage
python-hatch-fancy-pypi-readme
python-hatchling
python-pytest
python-pytest-timeout
python-tox))
(propagated-inputs
(list python-nltk-3.4))
(list python-importlib-metadata python-typing-extensions))
(home-page
"https://github.com/yeraydiazdiaz/lunr.py")
(synopsis "Full-text search library")
@ -2560,13 +2583,13 @@ NetCDF files can also be read and modified. Python-HDF4 is a fork of
(define-public python-h5netcdf
(package
(name "python-h5netcdf")
(version "1.1.0")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "h5netcdf" version))
(sha256
(base32 "0mmzfr6k55zqxxpb64gvdqisak8s1zb2r04yzkmp0wzd7dbknb4k"))))
(base32 "1kw3cf01kziwxmb84x0cy6vbpsmqjm0k1dm34i6b4d7bv8kw0wd1"))))
(build-system pyproject-build-system)
(native-inputs
(list python-netcdf4
@ -5147,14 +5170,14 @@ interfaces.")
(define-public python-click
(package
(name "python-click")
(version "8.1.3")
(version "8.1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "click" version))
(sha256
(base32
"13kvp8visj5xh9d43brnda6q0kc1s40flxa5cw0p0a9hzf5dr0kn"))))
"1pm6khdv88h764scik67jki98xbyj367h591j8hpwy4y8nnm766a"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -6231,6 +6254,30 @@ important tasks for becoming a daemon process:
;; Only setup.py is gpl3+, everything else is apache 2.0 licensed.
(license (list license:asl2.0 license:gpl3+))))
(define-public python-annotated-types
(package
(name "python-annotated-types")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "annotated_types" version))
(sha256
(base32 "0paaz0i4xqk335ji5w887i2bhgm2krnzr6by4sfgsgz50zl3jcsn"))))
(build-system pyproject-build-system)
(native-inputs
(list python-hatchling
python-pytest))
(propagated-inputs (list python-typing-extensions))
(home-page "https://github.com/annotated-types/annotated-types")
(synopsis "Reusable constraint types to use with typing.Annotated")
(description "This package provides metadata objects which can be used to
represent common constraints such as upper and lower bounds on scalar values and
collection sizes, a Predicate marker for runtime checks, and descriptions of how
we intend these metadata to be interpreted. In some cases, we also note
alternative representations which do not require this package.")
(license license:expat)))
(define-public python-anytree
(package
(name "python-anytree")
@ -7389,6 +7436,101 @@ which can produce feeds in RSS 2.0, RSS 0.91, and Atom formats.")
errors when data is invalid.")
(license license:expat)))
(define-public python-pydantic-2
(package
(inherit python-pydantic)
(name "python-pydantic")
(version "2.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydantic" version))
(sha256
(base32 "0yiz75zp93x6x2czm772cz5pzn00i703irncjwb99c1m4p35gvxk"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags #~(list "--ignore=tests/test_docs.py" ; no pytest_examples
;; need python-email-validator >= 2.0.0
"-k not test_fastapi_startup_perf")
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda _
;; Remove the addopts from pyproject.toml, it breaks the 'check phase.
(substitute* "pyproject.toml"
(("'--benchmark") "#'--benchmark")))))))
(native-inputs
(list python-hatchling
python-hatch-fancy-pypi-readme
python-cloudpickle
python-dirty-equals
python-faker
python-pytest
python-pytest-benchmark
python-pytest-mock))
(propagated-inputs
(list python-annotated-types
python-pydantic-core
python-typing-extensions))))
(define-public python-pydantic-core
(package
(name "python-pydantic-core")
(version "2.14.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydantic_core" version))
(sha256
(base32 "0j79pd6ixapsiwsigsxzmvbrpmdr7f7c4l9sl7xl6a1pjp9w3l0z"))))
(build-system cargo-build-system)
(arguments
(list
#:imported-modules `(,@%cargo-build-system-modules
,@%pyproject-build-system-modules)
#:modules '((guix build cargo-build-system)
((guix build pyproject-build-system) #:prefix py:)
(guix build utils))
#:phases
#~(modify-phases %standard-phases
(add-after 'prepare-python-module 'build-python-module
(assoc-ref py:%standard-phases 'build))
(add-after 'build-python-module 'install-python-module
(assoc-ref py:%standard-phases 'install)))
#:cargo-inputs
`(("rust-ahash" ,rust-ahash-0.8)
("rust-base64" ,rust-base64-0.21)
("rust-enum-dispatch" ,rust-enum-dispatch-0.3)
("rust-idna" ,rust-idna-0.4)
("rust-jiter" ,rust-jiter-0.0.4)
("rust-num-bigint" ,rust-num-bigint-0.4)
("rust-python3-dll-a" ,rust-python3-dll-a-0.2)
("rust-pyo3" ,rust-pyo3-0.20)
("rust-pyo3-build-config" ,rust-pyo3-build-config-0.20)
("rust-regex" ,rust-regex-1)
("rust-strum" ,rust-strum-0.25)
("rust-strum-macros" ,rust-strum-macros-0.25)
("rust-serde" ,rust-serde-1)
("rust-serde-json" ,rust-serde-json-1)
("rust-smallvec" ,rust-smallvec-1)
("rust-speedate" ,rust-speedate-0.13)
("rust-url" ,rust-url-2)
("rust-uuid" ,rust-uuid-1)
("rust-version-check" ,rust-version-check-0.9))
#:cargo-development-inputs
`(("rust-pyo3" ,rust-pyo3-0.20))
#:install-source? #false))
(native-inputs
(list maturin python-wrapper))
(propagated-inputs
(list python-typing-extensions))
(home-page "https://github.com/pydantic/pydantic-core")
(synopsis "Core validation logic for pydantic")
(description "This package provides the core functionality for pydantic
validation and serialization.")
(license license:expat)))
(define-public python-pydantic-cli
(package
(name "python-pydantic-cli")
@ -17898,17 +18040,17 @@ that deprecated code is eventually removed.")
(define-public python-jmespath
(package
(name "python-jmespath")
(version "1.0.0")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jmespath" version))
(sha256
(base32
"0pmzfi230zfgiq2rz896kbb9f7mp0lnrjdl6x1npvxfixn0f5454"))))
"1gpdc1f0q5c9scmbw1l9g40jjfk3pxwg91ayvn7xbvvddlh1n9lh"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(list python-pytest))
(synopsis "JSON Matching Expressions")
(description "JMESPath (pronounced james path) is a Python library that
allows one to declaratively specify how to extract elements from a JSON
@ -21731,20 +21873,6 @@ JSON) codec.")
reasoning, wrappers for natural language processing libraries.")
(license license:asl2.0)))
;; Versions >=3.5 breaks backward-compatibility,
;; so we keep version 3.4.x around for a while.
(define-public python-nltk-3.4
(package
(inherit python-nltk)
(version "3.4.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nltk" version ".zip"))
(sha256
(base32 "153x2clrnigs74jdgnn3qmljdjj4gprmvpdvh49i18ls4m8mbm5y"))))
(propagated-inputs (list python-six))))
(define-public python-pymongo
(package
(name "python-pymongo")
@ -31996,7 +32124,18 @@ and frame grabber interface.")
;; nondeterministically (see:
;; https://github.com/scikit-build/scikit-build/issues/711).
"and not test_generator_cleanup "
"and not test_generator_selection "))))))))
"and not test_generator_selection "
;; … and there's more of them
"and not test_cxx_compiler "
"and not test_fortran_compiler ")))))
(add-after 'install 'install-cmake
(lambda* (#:key outputs #:allow-other-keys)
(let ((lib (string-append (assoc-ref outputs "out")
"/lib/cmake/modules")))
(mkdir-p lib)
(with-directory-excursion "skbuild/resources/cmake"
(for-each (lambda (file) (install-file file lib))
(find-files "." "\\.cmake")))))))))
(native-inputs
(list cmake-minimal
gfortran