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gnu: python-dendropy: Update to 4.2.0.
* gnu/packages/bioinformatics.scm (python-dendropy): Update to 4.2.0. [source]: Remove patch. (python2-dendropy)[source]: Use the same source as python-dendropy. * gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
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3 changed files with 2 additions and 38 deletions
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@ -1930,19 +1930,14 @@ accessing bigWig files.")
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(define-public python-dendropy
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(package
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(name "python-dendropy")
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(version "4.1.0")
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(version "4.2.0")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "DendroPy" version))
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(sha256
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(base32
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"1jfz7gp18wph311w1yygbvjanb3n5mdqal439bb6myw41dwb5m63"))
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;; There are two known test failures that will be fixed in the next
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;; release after 4.1.0.
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;; https://github.com/jeetsukumaran/DendroPy/issues/48
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(patches (search-patches
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"python-dendropy-exclude-failing-tests.patch"))))
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"15c7s3d5gf19ljsxvq5advaa752wfi7pwrdjyhzmg85hccyvp47p"))))
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(build-system python-build-system)
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(home-page "http://packages.python.org/DendroPy/")
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(synopsis "Library for phylogenetics and phylogenetic computing")
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@ -1957,15 +1952,6 @@ trees (phylogenies) and characters.")
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(let ((base (package-with-python2 (strip-python2-variant python-dendropy))))
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(package
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(inherit base)
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;; Do not use same source as 'python-dendropy' because the patched
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;; failing tests do not occur on Python 2.
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "DendroPy" (package-version base)))
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(sha256
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(base32
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"1jfz7gp18wph311w1yygbvjanb3n5mdqal439bb6myw41dwb5m63"))))
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(arguments
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`(#:python ,python-2
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#:phases
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