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gnu: r-hdf5array: Fix r-rhdf5libs linking.

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* gnu/packages/bioconductor.scm (r-hdf5array): [arguments]: Avoid to have a
plain directory on the list of libraries to link.

Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
This commit is contained in:
zimoun 2020-12-04 03:20:55 +01:00 • committed by Ricardo Wurmus
parent b58c4e7613
commit 26cf5eb568
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1 changed files with 11 additions and 0 deletions
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gnu/packages/bioconductor.scm
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@ -8609,6 +8609,17 @@ provided.")
"1hr149q03p09y1cjnx8av854j53041wfyq66xpsjw4mypzjf6f28")))) "1hr149q03p09y1cjnx8av854j53041wfyq66xpsjw4mypzjf6f28"))))
(properties `((upstream-name . "HDF5Array"))) (properties `((upstream-name . "HDF5Array")))
(build-system r-build-system) (build-system r-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-linking
(lambda _
(substitute* "src/Makevars"
;; This is to avoid having a plain directory on the list of
;; libraries to link.
(("\\(RHDF5LIB_LIBS\\)" match)
(string-append match "/libhdf5.a")))
#t)))))
(inputs (inputs
`(("zlib" ,zlib))) `(("zlib" ,zlib)))
(propagated-inputs (propagated-inputs