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gnu: gdcm: Fix build.

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* gnu/packages/bioinformatics.scm (gdcm)[arguments]
<#:configure-flags>: Move excluded tests ...
<#:excluded-tests>: ... to here.

Change-Id: I42cc96a9220e6e5aed1b4fe82ff10835789806e6
This commit is contained in:
Greg Hogan 2025-07-28 17:08:16 +00:00
parent 464ba5312d
commit 2ddc161ff0
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1 changed files with 21 additions and 21 deletions
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42
gnu/packages/bioinformatics.scm
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@ -25194,33 +25194,33 @@ module capable of computing base-level alignments for very large sequences.")
(outputs '("out" "doc"))
(arguments
(list
#:test-exclude (string-join (list "TestFileMetaInformation"
"TestElement2"
"TestSCUValidation"
"TestWriter"
"TestAnonymizer4"
"TestPrinter1"
"TestEcho"
;; The scanner tests depend on TestWriter output.
"TestStrictScanner1"
"TestStrictScanner2_1"
"TestStrictScanner2"
"TestStrictScanner2_2"
"TestFind")
"|")
#:configure-flags
#~(list "-DGDCM_BUILD_TESTING=true"
"-DGDCM_DOCUMENTATION:BOOL=ON"
"-DGDCM_PDF_DOCUMENTATION:BOOL=OFF"
(string-append "-DGDCM_INSTALL_DOC_DIR="
#$output:doc "/share/doc/" #$name))
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'set-HOME
;; The build spams ‘Fontconfig error: No writable cache
;; directories’ in a seemingly endless loop otherwise.
(lambda _
(setenv "HOME" "/tmp"))))
#:configure-flags
#~(list "-DGDCM_BUILD_TESTING=true"
(string-append "-DCMAKE_CTEST_ARGUMENTS=-E;"
"'TestFileMetaInformation"
"|TestElement2"
"|TestSCUValidation"
"|TestWriter"
"|TestAnonymizer4"
"|TestPrinter1"
"|TestEcho"
;; The scanner tests depend on TestWriter output
"|TestStrictScanner1"
"|TestStrictScanner2_1"
"|TestStrictScanner2"
"|TestStrictScanner2_2"
"|TestFind'")
"-DGDCM_DOCUMENTATION:BOOL=ON"
"-DGDCM_PDF_DOCUMENTATION:BOOL=OFF"
(string-append "-DGDCM_INSTALL_DOC_DIR="
#$output:doc "/share/doc/" #$name))))
(setenv "HOME" "/tmp"))))))
(native-inputs (list docbook-xsl doxygen graphviz libxslt))
(home-page "https://gdcm.sourceforge.net/wiki/index.php/Main_Page")
(synopsis "Grassroots DICOM library")