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Merge remote-tracking branch 'origin/master' into core-updates

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Efraim Flashner 2017-03-22 12:57:37 +02:00
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gnu/packages/python.scm
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@ -1749,14 +1749,14 @@ standard library.")
(define-public python-py
(package
(name "python-py")
(version "1.4.31")
(version "1.4.32")
(source
(origin
(method url-fetch)
(uri (pypi-uri "py" version))
(sha256
(base32
"0561gz2w3i825gyl42mcq14y3dcgkapfiv5zv9a2bz15qxiijl56"))))
"19s1pql9pq85h1qzsdwgyb8a3k1qgkvh33b02m8kfqhizz8rzf64"))))
(build-system python-build-system)
(arguments
;; FIXME: "ImportError: 'test' module incorrectly imported from
@ -3144,14 +3144,14 @@ augment the changelog, but it can be used for other documents, too.")
(define-public python-feedgenerator
(package
(name "python-feedgenerator")
(version "1.8")
(version "1.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "feedgenerator" version))
(sha256
(base32
"0mkimp1fpdan4p3882vzcws4l594k71ich4g0wq97jbra7p602n0"))
"01mirwkm7xfx539hmvj7g9da1j51gw5lsx74dr0glizskjm5vq2s"))
(modules '((guix build utils)))
(snippet
'(begin
@ -5873,6 +5873,9 @@ of the structure, dynamics, and functions of complex networks.")
(arguments
;; TODO: Package missing test dependencies.
'(#:tests? #f))
(propagated-inputs
`(("python-wrapt" ,python-wrapt)
("python-requests" ,python-requests)))
(home-page "https://bitbucket.org/snakemake/snakemake/wiki/Home")
(synopsis "Python-based execution environment for make-like workflows")
(description
@ -6491,14 +6494,14 @@ Python.")
(define-public python-markdown
(package
(name "python-markdown")
(version "2.6.7")
(version "2.6.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Markdown" version))
(sha256
(base32
"1h055llfd0ps0ig7qb3v1j9068xv90dc9s7xkhkgz9zg8r4g5sys"))))
"0cqfhr1km2s5d8jm6hbwgkrrj9hvkjf2gab3s2axlrw1clgaij0a"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -6858,17 +6861,14 @@ and MAC network addresses.")
(define-public python-wrapt
(package
(name "python-wrapt")
(version "1.10.5")
(version "1.10.8")
(source
(origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/source/w/wrapt/wrapt-"
version
".tar.gz"))
(uri (pypi-uri "wrapt" version))
(sha256
(base32
"0cq8rlpzkxzk48b50yrfhzn1d1hrq4gjcdqlrgq4v5palgiv9jwr"))))
"0wrcm1mydvfivbkzz0h81ygzdchnscshi6xvy5n3r21r9s0px8af"))))
(build-system python-build-system)
(arguments
;; Tests are not included in the tarball, they are only available in the
@ -8247,15 +8247,14 @@ security policies on Python objects.")
(define-public python-zope-component
(package
(name "python-zope-component")
(version "4.2.2")
(version "4.3.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://pypi.python.org/packages/source/z"
"/zope.component/zope.component-" version ".tar.gz"))
(uri (pypi-uri "zope.component" version))
(sha256
(base32
"06pqr8m5jv12xjyy5b59hh9anl61cxkzhw9mka33r3nxalmi2b18"))))
"1hlvzwj1kcfz1qms1dzhwsshpsf38z9clmyksb1gh41n8k3kchdv"))))
(build-system python-build-system)
(arguments
;; Skip tests due to circular dependency with python-zope-security.
@ -8497,14 +8496,14 @@ the standard library.")
(define-public python-texttable
(package
(name "python-texttable")
(version "0.8.4")
(version "0.8.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "texttable" version))
(sha256
(base32
"0bkhs4dx9s6g7fpb969hygq56hyz4ncfamlynw72s0n6nqfbd1w5"))))
"1liiiydgkg37i46a418aw19fyf6z3ds51wdwwpyjbs12x0phhf4a"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; no tests
(home-page "https://github.com/foutaise/texttable/")
@ -8542,13 +8541,13 @@ WebSocket usage in Python programs.")
(define-public python-atomicwrites
(package
(name "python-atomicwrites")
(version "1.1.0")
(version "1.1.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "atomicwrites" version))
(sha256
(base32
"1s01dci8arsl9d9vr5nz1fk9znldp1z3l4yl43f0c27z12b8yxl0"))))
"11bm90fwm2avvf4f3ib8g925w7jr4m11vcsinn1bi6ns4bm32214"))))
(build-system python-build-system)
(synopsis "Atomic file writes in Python")
(description "Library for atomic file writes using platform dependent tools
@ -10053,14 +10052,14 @@ introspection of @code{zope.interface} instances in code.")
(define-public python-psycopg2
(package
(name "python-psycopg2")
(version "2.6.1")
(version "2.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "psycopg2" version))
(sha256
(base32
"0k4hshvrwsh8yagydyxgmd0pjm29lwdxkngcq9fzfzkmpsxrmkva"))))
"0p60z2gwfcal30y2w8gprflchp1kcg9qblc5rn782p4wxl90wjbh"))))
(build-system python-build-system)
(arguments
;; Tests would require a postgresql database "psycopg2_test"
@ -11163,17 +11162,14 @@ are optionally backed by a C extension built on librdkafka.")
(define-public python-wcwidth
(package
(name "python-wcwidth")
(version "0.1.6")
(version "0.1.7")
(source
(origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/"
"c2/d1/7689293086a8d5320025080cde0e3155b94ae0a7496fb89a3fbaa92c354a/"
"wcwidth-" version ".tar.gz"))
(uri (pypi-uri "wcwidth" version))
(sha256
(base32
"02wjrpf001gjdjsaxxbzcwfg19crlk2dbddayrfc2v06f53yrcyw"))))
"0pn6dflzm609m4r3i8ik5ni9ijjbb5fa3vg1n7hn6vkd49r77wrx"))))
(build-system python-build-system)
(home-page "https://github.com/jquast/wcwidth")
(synopsis "Measure number of terminal column cells of wide-character codes")
@ -12542,13 +12538,13 @@ English stemmer.")
(define-public python-sphinx-cloud-sptheme
(package
(name "python-sphinx-cloud-sptheme")
(version "1.7.1")
(version "1.8.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "cloud_sptheme" version))
(sha256
(base32
"0zm9ap4p5dzln8f1m2immadaxv2xpg8jg4w53y52rhfl7pdb58vy"))))
"1dniqb6a39yh786f86c4jn666rwnyi1jvzn4616zhcchb7sfdshd"))))
(build-system python-build-system)
;; FIXME: The 'pypi' release archive does not contain tests.
(arguments '(#:tests? #f))
@ -13671,3 +13667,212 @@ users' sessions over extended periods of time.")
(define-public python2-flask-login
(package-with-python2 python-flask-login))
(define-public python-astroid
(package
(name "python-astroid")
(version "1.4.9")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/PyCQA/astroid/archive/astroid-"
version ".tar.gz"))
(sha256
(base32
"0j0wgy54d13a470vm4b9rdjk99n1hmdxpf34x9k3pbmi9w9b566z"))))
(build-system python-build-system)
(propagated-inputs
`(("python-lazy-object-proxy" ,python-lazy-object-proxy)
("python-six" ,python-six)
("python-wrapt" ,python-wrapt)))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(zero? (system* "python" "-m" "unittest" "discover"
"-p" "unittest*.py")))))))
(home-page "https://github.com/PyCQA/astroid")
(synopsis "Common base representation of python source code for pylint and
other projects")
(description "@code{python-astroid} provides a common base representation
of python source code for projects such as pychecker, pyreverse, pylint, etc.
It provides a compatible representation which comes from the _ast module. It
rebuilds the tree generated by the builtin _ast module by recursively walking
down the AST and building an extended ast. The new node classes have
additional methods and attributes for different usages. They include some
support for static inference and local name scopes. Furthermore, astroid
builds partial trees by inspecting living objects.")
(license license:lgpl2.1+)))
(define-public python2-astroid
(package-with-python2 python-astroid))
(define-public python-isort
(package
(name "python-isort")
(version "4.2.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/timothycrosley/isort/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0zsrgkb0krn5476yncy5dd56k7dk34zqb4bnlvwy44ixgilyjmfh"))))
(build-system python-build-system)
(native-inputs
`(("python-mock" ,python-mock)
("python-pytest" ,python-pytest)))
(home-page "https://github.com/timothycrosley/isort")
(synopsis "Python utility/library to sort python imports")
(description "@code{python-isort} is a python utility/library to sort
imports alphabetically, and automatically separated into sections. It
provides a command line utility, a python library and plugins for various
editors.")
(license license:expat)))
(define-public python2-isort
(package-with-python2 python-isort))
(define-public python2-backports-functools-lru-cache
(package
(name "python2-backports-functools-lru-cache")
(version "1.3")
(source
(origin
(method url-fetch)
;; only the pypi tarballs contain the necessary metadata
(uri (pypi-uri "backports.functools_lru_cache" version))
(sha256
(base32
"158ysf2hb0q4p4695abfiym9x1ywg0dgh8a3apd7gqaaxjy22jj4"))))
(build-system python-build-system)
(native-inputs
`(("python2-setuptools-scm" ,python2-setuptools-scm)))
(arguments
`(#:python ,python-2))
(home-page "https://github.com/jaraco/backports.functools_lru_cache")
(synopsis "Backport of functools.lru_cache from Python 3.3")
(description "@code{python2-backports-functools-lru-cache} is a backport
of @code{functools.lru_cache} from python 3.3.")
(license license:expat)))
(define-public python-configparser
(package
(name "python-configparser")
(version "3.5.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://bitbucket.org/ambv/configparser/get/"
version ".tar.bz2"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0waq40as14abwzbb321hfz4vr1fi363nscy32ga14qvfygrg96wa"))))
(build-system python-build-system)
(home-page "http://docs.python.org/py3k/library/configparser.html")
(synopsis "Backport of configparser from python 3.5")
(description "@code{python-configparser} is a backport of
@code{configparser} from Python 3.5 so that it can be used directly
in other versions.")
(license license:expat)))
(define-public python2-configparser
(package-with-python2 python-configparser))
(define-public python2-coverage-test-runner
(package
(name "python2-coverage-test-runner")
(version "1.11")
(source
(origin
(method url-fetch)
(uri (string-append
"http://git.liw.fi/cgi-bin/cgit/cgit.cgi/"
"coverage-test-runner/snapshot/coverage-test-runner-"
version ".tar.gz"))
(sha256
(base32
"0y1m7z3dl63kmhcmydl1mwg0hacnf6ghrx9dah17j9iasssfa3g7"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(zero? (system* "./testrun")))))))
(propagated-inputs
`(("python2-coverage" ,python2-coverage)))
(home-page "https://liw.fi/coverage-test-runner/")
(synopsis "Python module for running unit tests")
(description "@code{CoverageTestRunner} is a python module for running
unit tests and failing them if the unit test module does not excercise all
statements in the module it tests.")
(license license:gpl3+)))
(define-public python-pylint
(package
(name "python-pylint")
(version "1.6.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/PyCQA/pylint/archive/pylint-"
version ".tar.gz"))
(sha256
(base32
"08pmgflmq2zrzrn9nkfadzwa5vybz46wvwxhrsd2mjlcgsh4rzbm"))))
(build-system python-build-system)
(native-inputs
`(("python-tox" ,python-tox)))
(propagated-inputs
`(("python-astroid" ,python-astroid)
("python-isort" ,python-isort)
("python-mccabe" ,python-mccabe)
("python-six" ,python-six)))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; Somehow, tests for python2-pylint
;; fail if run from the build directory
(let ((work "/tmp/work"))
(mkdir-p work)
(setenv "PYTHONPATH"
(string-append (getenv "PYTHONPATH") ":" work))
(copy-recursively "." work)
(with-directory-excursion "/tmp"
(zero? (system* "python" "-m" "unittest" "discover"
"-s" (string-append work "/pylint/test")
"-p" "*test_*.py")))))))))
(home-page "https://github.com/PyCQA/pylint")
(synopsis "Python source code analyzer which looks for coding standard
errors")
(description "Pylint is a Python source code analyzer which looks
for programming errors, helps enforcing a coding standard and sniffs
for some code smells (as defined in Martin Fowler's Refactoring book).
Pylint has many rules enabled by default, way too much to silence them
all on a minimally sized program. It's highly configurable and handle
pragmas to control it from within your code. Additionally, it is
possible to write plugins to add your own checks.")
(license license:gpl2+)))
(define-public python2-pylint
(let ((pylint (package-with-python2 python-pylint)))
(package (inherit pylint)
(propagated-inputs
`(("python2-backports-functools-lru-cache"
,python2-backports-functools-lru-cache)
("python2-configparser" ,python2-configparser)
,@(package-propagated-inputs pylint))))))