Merge branch 'master' into core-updates

This commit is contained in:
Marius Bakke 2019-05-01 23:11:41 +02:00
commit 3b458d5462
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372 changed files with 206335 additions and 131317 deletions

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@ -23,6 +23,7 @@
;;; Copyright © 2018 Timothy Sample <samplet@ngyro.com>
;;; Copyright © 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2019 Jovany Leandro G.C <bit4bit@riseup.net>
;;; Copyright © 2019 Kei Kebreau <kkebreau@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
@ -45,10 +46,9 @@
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix build-system ant)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (guix build-system haskell)
#:use-module (guix build-system go)
#:use-module (guix build-system python)
#:use-module (guix build-system trivial)
#:use-module (gnu packages apr)
@ -69,12 +69,7 @@
#:use-module (gnu packages gl)
#:use-module (gnu packages groff)
#:use-module (gnu packages guile)
#:use-module (gnu packages haskell)
#:use-module (gnu packages haskell-check)
#:use-module (gnu packages haskell-crypto)
#:use-module (gnu packages haskell-web)
#:use-module (gnu packages image)
#:use-module (gnu packages java)
#:use-module (gnu packages linux)
#:use-module (gnu packages maths)
#:use-module (gnu packages nano)
@ -408,7 +403,7 @@ as well as the classic centralized workflow.")
,@(transitive-input-references
'inputs
(map (lambda (l)
(assoc l (inputs)))
(assoc l (package-inputs this-package)))
'("perl-authen-sasl"
"perl-net-smtp-ssl"
"perl-io-socket-ssl")))))))
@ -421,7 +416,7 @@ as well as the classic centralized workflow.")
,@(transitive-input-references
'inputs
(map (lambda (l)
(assoc l (inputs)))
(assoc l (package-inputs this-package)))
'("perl-cgi")))))))
;; Tell 'git-submodule' where Perl is.
@ -529,13 +524,14 @@ everything from small to very large projects with speed and efficiency.")
(name "libgit2")
(version "0.28.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/libgit2/libgit2/"
"archive/v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/libgit2/libgit2.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0swk2dyq5a4p1jn5wvbcsrxckhh808vifxz5y8w663avg541188c"))
"0j5p0hhz2wizvgkf0nbpd8g32mb5bg1vp8ckpbhb0pq38ja4h43r"))
(patches (search-patches "libgit2-avoid-python.patch"
"libgit2-mtime-0.patch"))
@ -558,6 +554,10 @@ everything from small to very large projects with speed and efficiency.")
(("/bin/cp") (which "cp"))
(("/bin/rm") (which "rm")))
#t))
(add-after 'unpack 'make-git-checkout-writable
(lambda _
(for-each make-file-writable (find-files "."))
#t))
;; Run checks more verbosely.
(replace 'check
(lambda _ (invoke "./libgit2_clar" "-v" "-Q"))))))
@ -584,14 +584,15 @@ write native speed custom Git applications in any language with bindings.")
(package
(name "git-crypt")
(version "0.5.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/AGWA/git-crypt"
"/archive/" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0454fdmgm5f3razkn8n03lfqm5zyzvr4r2528zmlxiwba9518l2i"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/AGWA/git-crypt.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1x9209n3k49k998saadr2d0lmvs01smjinx7gzzyjdwj9l904sii"))))
(build-system gnu-build-system)
(inputs
`(("git" ,git)
@ -778,14 +779,13 @@ a built-in cache to decrease server I/O pressure.")
(version "0.5.5")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/davisp/ghp-import/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(method git-fetch)
(uri (git-reference
(url "https://github.com/davisp/ghp-import.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0x887v690xsac2hzjkpbvp3a6crh3m08mqbk3nb4xwc9dnk869q7"))))
(base32 "12pmw3zz3i57ljnm0rxdyjqdyhisbvy18mjwkb3bzp5pgzs2f45c"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
@ -1033,14 +1033,15 @@ manipulate them in various ways.")
(package
(name "vcsh")
(version "1.20151229")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/RichiH/vcsh/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1ym3swkh738c3vciffvlr96vqzhwmzkb8ajqzap8f0j9n039a1mf"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/RichiH/vcsh.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1grpj45nbpv4j60vd2kg4rj53zrm0bc0h9l4pfd3c2mwbvywm6ab"))))
(build-system gnu-build-system)
(native-inputs
`(("which" ,which)))
@ -1107,15 +1108,15 @@ also walk each side of a merge and test those changes individually.")
(package
(name "gitolite")
(version "3.6.7")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/sitaramc/gitolite/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1idxipg0df80bhjcxgwxs3lllqnkvhwpinmfv1xvg1l98fxiapgp"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sitaramc/gitolite.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0rmyzr66lxh2ildf3h1nh3hh2ndwk21rjdin50r5vhwbdd7jg8vb"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no tests
@ -1366,7 +1367,7 @@ following features:
(home-page "https://subversion.apache.org/")
(synopsis "Revision control system")
(description
"Subversion (aka. ``svn'') exists to be recognized and adopted as a
"@dfn{Subversion} (svn) exists to be recognized and adopted as a
centralized version control system characterized by its
reliability as a safe haven for valuable data; the simplicity of its model and
usage; and its ability to support the needs of a wide variety of users and
@ -1778,14 +1779,15 @@ output of the @code{git} command.")
(package
(name "findnewest")
(version "0.3")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/0-wiz-0/findnewest/archive/findnewest-"
version ".tar.gz"))
(sha256
(base32
"1ydis4y0amkgfr4y60sn076f1l41ya2kn89kfd9fqf44f9ccgb5r"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/0-wiz-0/findnewest.git")
(commit (string-append "findnewest-" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1x1cbn2b27h5r0ah5xc06fkalfdci2ngrgd4wibxjw0h88h0nvgq"))))
(build-system gnu-build-system)
(native-inputs `(("autoconf" ,autoconf)
("automake" ,automake)))
@ -1849,15 +1851,15 @@ Mercurial, Bazaar, Darcs, CVS, Fossil, and Veracity.")
(package
(name "git-annex-remote-hubic")
(version "0.3.1")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/Schnouki/" name "/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"196g3jkaybjx11nbr51n0cjps3wjzb145ab76y717diqvvxp5v4r"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Schnouki/git-annex-remote-hubic.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "16y9sk67hfi17h9n2kkffyabfccksh5rab40hhk69v6cxmbpn2sx"))))
(build-system python-build-system)
(arguments `(#:python ,python-2))
(native-inputs
@ -1968,180 +1970,6 @@ a built-in wiki, built-in file browsing, built-in tickets system, etc.")
be served with a HTTP file server of your choice.")
(license license:expat)))
;; Darcs has no https support: http://irclog.perlgeek.de/darcs/2016-09-17
;; http://darcs.net/manual/Configuring_darcs.html#SECTION00440070000000000000
;; and results of search engines will show that if the protocol is http, https
;; is never mentioned.
(define-public darcs
(package
(name "darcs")
(version "2.14.2")
(source
(origin
(method url-fetch)
(uri (string-append "https://hackage.haskell.org/package/darcs/"
"darcs-" version ".tar.gz"))
(sha256
(base32
"0zm2486gyhiga1amclbg92cd09bvki6vgh0ll75hv5kl72j61lb5"))
(modules '((guix build utils)))
;; Remove time-dependent code for reproducibility.
(snippet
'(begin
(substitute* "darcs/darcs.hs"
(("__DATE__") "\"1970-01-01\"")
(("__TIME__") "\"00:00:00\""))
#t))))
(build-system haskell-build-system)
(arguments
`(#:configure-flags '("-fpkgconfig" "-fcurl" "-flibiconv" "-fthreaded"
"-fnetwork-uri" "-fhttp" "--flag=executable"
"--flag=library")
#:phases
(modify-phases %standard-phases
(add-after 'patch-source-shebangs 'patch-sh
(lambda _
(substitute* "tests/issue538.sh"
(("/bin/sh") (which "sh")))
#t)))))
(inputs
`(("ghc-cmdargs" ,ghc-cmdargs)
("ghc-split" ,ghc-split)
("ghc-test-framework-quickcheck2" ,ghc-test-framework-quickcheck2)
("ghc-test-framework-hunit" ,ghc-test-framework-hunit)
("ghc-test-framework" ,ghc-test-framework)
("ghc-quickcheck" ,ghc-quickcheck)
("ghc-findbin" ,ghc-findbin)
("ghc-hunit" ,ghc-hunit)
("ghc-async" ,ghc-async)
("ghc-attoparsec" ,ghc-attoparsec)
("ghc-base16-bytestring" ,ghc-base16-bytestring)
("ghc-bytestring-builder" ,ghc-bytestring-builder)
("ghc-cryptohash" ,ghc-cryptohash)
("ghc-data-ordlist" ,ghc-data-ordlist)
("ghc-fgl" ,ghc-fgl)
("ghc-system-filepath" ,ghc-system-filepath)
("ghc-graphviz" ,ghc-graphviz)
("ghc-hashable" ,ghc-hashable)
("ghc-html" ,ghc-html)
("ghc-mmap" ,ghc-mmap)
("ghc-old-time" ,ghc-old-time)
("ghc-parsec" ,ghc-parsec)
("ghc-random" ,ghc-random)
("ghc-regex-applicative" ,ghc-regex-applicative)
("ghc-regex-compat-tdfa" ,ghc-regex-compat-tdfa)
("ghc-sandi" ,ghc-sandi)
("ghc-shelly" ,ghc-shelly)
("ghc-tar" ,ghc-tar)
("ghc-transformers-compat" ,ghc-transformers-compat)
("ghc-unix-compat" ,ghc-unix-compat)
("ghc-utf8-string" ,ghc-utf8-string)
("ghc-vector" ,ghc-vector)
("ghc-zip-archive" ,ghc-zip-archive)
("ghc-zlib" ,ghc-zlib)
("ghc-http" ,ghc-http)
("curl" ,curl)
("ghc" ,ghc)
("ncurses" ,ncurses)
("perl" ,perl)
("libiconv" ,libiconv)
("ghc-network" ,ghc-network)
("ghc-network-uri" ,ghc-network-uri)))
(native-inputs
`(("pkg-config" ,pkg-config)))
(home-page "http://darcs.net")
(synopsis "Distributed Revision Control System")
(description
"Darcs is a revision control system. It is:
@enumerate
@item Distributed: Every user has access to the full command set, removing boundaries
between server and client or committer and non-committers.
@item Interactive: Darcs is easy to learn and efficient to use because it asks you
questions in response to simple commands, giving you choices in your work flow.
You can choose to record one change in a file, while ignoring another. As you update
from upstream, you can review each patch name, even the full diff for interesting
patches.
@item Smart: Originally developed by physicist David Roundy, darcs is based on a
unique algebra of patches called @url{http://darcs.net/Theory,Patchtheory}.
@end enumerate")
(license license:gpl2)))
(define-public java-jgit
(package
(name "java-jgit")
(version "4.7.0.201704051617-r")
(source (origin
(method url-fetch)
(uri (string-append "https://repo1.maven.org/maven2/"
"org/eclipse/jgit/org.eclipse.jgit/"
version "/org.eclipse.jgit-"
version "-sources.jar"))
(sha256
(base32
"13ii4jn02ynzq6i7gsyi21k2i94jpc85wf6bcm31q4cyvzv0mk4k"))))
(build-system ant-build-system)
(arguments
`(#:tests? #f ; There are no tests to run.
#:jar-name "jgit.jar"
;; JGit must be built with a JDK supporting Java 8.
#:jdk ,icedtea-8
;; Target our older default JDK.
#:make-flags (list "-Dtarget=1.7")
#:phases
(modify-phases %standard-phases
;; The jar file generated by the default build.xml does not include
;; the text properties files, so we need to add them.
(add-after 'build 'add-properties
(lambda* (#:key jar-name #:allow-other-keys)
(with-directory-excursion "src"
(apply invoke "jar" "-uf"
(string-append "../build/jar/" jar-name)
(find-files "." "\\.properties$")))
#t)))))
(inputs
`(("java-classpathx-servletapi" ,java-classpathx-servletapi)
("java-javaewah" ,java-javaewah)
("java-jsch" ,java-jsch)
("java-slf4j-api" ,java-slf4j-api)))
(home-page "https://eclipse.org/jgit/")
(synopsis "Java library implementing the Git version control system")
(description "JGit is a lightweight, pure Java library implementing the
Git version control system, providing repository access routines, support for
network protocols, and core version control algorithms.")
(license license:edl1.0)))
;; For axoloti. This package can still be built with icedtea-7, which is
;; currently used as the default JDK.
(define-public java-jgit-4.2
(package (inherit java-jgit)
(version "4.2.0.201601211800-r")
(source (origin
(method url-fetch)
(uri (string-append "https://repo1.maven.org/maven2/"
"org/eclipse/jgit/org.eclipse.jgit/"
version "/org.eclipse.jgit-"
version "-sources.jar"))
(sha256
(base32
"15gm537iivhnzlkjym4x3wn5jqdjdragsw9pdpzqqg21nrc817mm"))))
(build-system ant-build-system)
(arguments
(substitute-keyword-arguments (package-arguments java-jgit)
;; Build for default JDK.
((#:jdk _) icedtea-7)
((#:phases phases)
`(modify-phases ,phases
(add-after 'unpack 'use-latest-javaewah-API
(lambda _
(substitute* "src/org/eclipse/jgit/internal/storage/file/BitmapIndexImpl.java"
(("wordinbits") "WORD_IN_BITS"))
#t))))))
(inputs
`(("java-javaewah" ,java-javaewah)
("java-jsch" ,java-jsch)
("java-slf4j-api" ,java-slf4j-api)))))
(define-public gource
(package
(name "gource")
@ -2230,133 +2058,6 @@ cases like all those little scripts in your @file{~/bin} directory, or a
directory full of HOWTOs.")
(license license:bsd-2)))
(define-public git-annex
(package
(name "git-annex")
(version "6.20180926")
(source
(origin
(method url-fetch)
(uri (string-append "https://hackage.haskell.org/package/"
"git-annex/git-annex-" version ".tar.gz"))
(sha256
(base32
"1251rj8h63y30sfqk0zh670yhz14p256y59n3590pg015pf3575d"))))
(build-system haskell-build-system)
(arguments
`(#:configure-flags
'("--flags=-Android -Assistant -Pairing -S3 -Webapp -WebDAV")
#:phases
(modify-phases %standard-phases
(add-before 'configure 'patch-shell
(lambda _
(substitute* "Utility/Shell.hs"
(("/bin/sh") (which "sh")))
#t))
(add-before 'configure 'factor-setup
(lambda _
;; Factor out necessary build logic from the provided
;; `Setup.hs' script. The script as-is does not work because
;; it cannot find its dependencies, and there is no obvious way
;; to tell it where to look. Note that we do not preserve the
;; code that installs man pages here.
(call-with-output-file "PreConf.hs"
(lambda (out)
(format out "import qualified Build.Configure as Configure~%")
(format out "main = Configure.run Configure.tests~%")))
(call-with-output-file "Setup.hs"
(lambda (out)
(format out "import Distribution.Simple~%")
(format out "main = defaultMain~%")))
#t))
(add-before 'configure 'pre-configure
(lambda _
(invoke "runhaskell" "PreConf.hs")
#t))
(replace 'check
(lambda _
;; We need to set the path so that Git recognizes
;; `git annex' as a custom command.
(setenv "PATH" (string-append (getenv "PATH") ":"
(getcwd) "/dist/build/git-annex"))
(with-directory-excursion "dist/build/git-annex"
(symlink "git-annex" "git-annex-shell"))
(invoke "git-annex" "test")
#t))
(add-after 'install 'install-symlinks
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin")))
(symlink (string-append bin "/git-annex")
(string-append bin "/git-annex-shell"))
(symlink (string-append bin "/git-annex")
(string-append bin "/git-remote-tor-annex"))
#t))))))
(inputs
`(("curl" ,curl)
("ghc-aeson" ,ghc-aeson)
("ghc-async" ,ghc-async)
("ghc-bloomfilter" ,ghc-bloomfilter)
("ghc-byteable" ,ghc-byteable)
("ghc-case-insensitive" ,ghc-case-insensitive)
("ghc-crypto-api" ,ghc-crypto-api)
("ghc-cryptonite" ,ghc-cryptonite)
("ghc-data-default" ,ghc-data-default)
("ghc-disk-free-space" ,ghc-disk-free-space)
("ghc-dlist" ,ghc-dlist)
("ghc-edit-distance" ,ghc-edit-distance)
("ghc-esqueleto" ,ghc-esqueleto)
("ghc-exceptions" ,ghc-exceptions)
("ghc-feed" ,ghc-feed)
("ghc-free" ,ghc-free)
("ghc-hslogger" ,ghc-hslogger)
("ghc-http-client" ,ghc-http-client)
("ghc-http-conduit" ,ghc-http-conduit)
("ghc-http-types" ,ghc-http-types)
("ghc-ifelse" ,ghc-ifelse)
("ghc-memory" ,ghc-memory)
("ghc-monad-control" ,ghc-monad-control)
("ghc-monad-logger" ,ghc-monad-logger)
("ghc-network" ,ghc-network)
("ghc-old-locale" ,ghc-old-locale)
("ghc-optparse-applicative" ,ghc-optparse-applicative)
("ghc-persistent" ,ghc-persistent)
("ghc-persistent-sqlite" ,ghc-persistent-sqlite)
("ghc-persistent-template" ,ghc-persistent-template)
("ghc-quickcheck" ,ghc-quickcheck)
("ghc-random" ,ghc-random)
("ghc-regex-tdfa" ,ghc-regex-tdfa)
("ghc-resourcet" ,ghc-resourcet)
("ghc-safesemaphore" ,ghc-safesemaphore)
("ghc-sandi" ,ghc-sandi)
("ghc-securemem" ,ghc-securemem)
("ghc-socks" ,ghc-socks)
("ghc-split" ,ghc-split)
("ghc-stm" ,ghc-stm)
("ghc-stm-chans" ,ghc-stm-chans)
("ghc-tagsoup" ,ghc-tagsoup)
("ghc-text" ,ghc-text)
("ghc-unix-compat" ,ghc-unix-compat)
("ghc-unordered-containers" ,ghc-unordered-containers)
("ghc-utf8-string" ,ghc-utf8-string)
("ghc-uuid" ,ghc-uuid)
("git" ,git)
("rsync" ,rsync)))
(native-inputs
`(("ghc-tasty" ,ghc-tasty)
("ghc-tasty-hunit" ,ghc-tasty-hunit)
("ghc-tasty-quickcheck" ,ghc-tasty-quickcheck)
("ghc-tasty-rerun" ,ghc-tasty-rerun)))
(home-page "https://git-annex.branchable.com/")
(synopsis "Manage files with Git, without checking in their contents")
(description "This package allows managing files with Git, without
checking the file contents into Git. It can store files in many places,
such as local hard drives and cloud storage services. It can also be
used to keep a folder in sync between computers.")
;; The web app is released under the AGPLv3+.
(license (list license:gpl3+
license:agpl3+))))
(define-public git-when-merged
;; Use an unreleased version to get a PY3 compatibility fix.
(let ((commit "ab6af7865a0ba55ba364a6c507e0be6f84f31c6d"))
@ -2413,18 +2114,18 @@ how information about the merge is displayed.")
(package
(name "git-imerge")
(version "1.1.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/mhagger/git-imerge/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0a6ay8fpgz3yd84jc40w41x0rcfpan6bcq4wd1hxiiqwb51jysb2"))))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mhagger/git-imerge.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0vi1w3f0yk4gqhxj2hzqafqq28rihyhyfnp8x7xzib96j2si14a4"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; The are only manual test scripts.
`(#:tests? #f ; only manual test scripts
#:make-flags (list (string-append "DESTDIR=" %output)
"PREFIX=")
#:phases
@ -2454,3 +2155,27 @@ design goals are to reduce the pain of resolving merge conflicts by finding
the smallest possible conflicts and to allow a merge to be saved, tested,
interrupted, published, and collaborated on while in progress.")
(license license:gpl2+)))
(define-public git-lfs
(package
(name "git-lfs")
(version "2.7.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/git-lfs/git-lfs")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"10v38w8qfz0x8750kv31n8gg2dimvq4wz40m374pd1xaypfs9670"))))
(build-system go-build-system)
(arguments
'(#:import-path "github.com/git-lfs/git-lfs"))
(home-page "https://git-lfs.github.com/")
(synopsis "Git extension for versioning large files")
(description
"Git Large File Storage (LFS) replaces large files such as audio samples,
videos, datasets, and graphics with text pointers inside Git, while storing the
file contents on a remote server.")
(license license:expat)))