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gnu: r-biocset: Add missing inputs.

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* gnu/packages/bioconductor.scm (r-biocset)[native-inputs]: Add r-gseabase and
r-org-hs-eg-db.
[arguments]: Add phase 'delete-bad-tests.

Change-Id: I062af0403952e209b07488afa5b939bee60cadc0
This commit is contained in:
Ricardo Wurmus 2024-11-26 17:13:07 +01:00
parent 965dd8b3bc
commit 3f2531f918
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GPG key ID: 197A5888235FACAC
1 changed files with 11 additions and 1 deletions
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12
gnu/packages/bioconductor.scm
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@ -22531,6 +22531,16 @@ analytics on packages.")
"1jl4q3r6zcn837kd627wfki6z42bxdfklrj97c4r3cr3bnbyxvk0"))))
(properties `((upstream-name . "BiocSet")))
(build-system r-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'delete-bad-tests
(lambda _
;; One test tries to connect to a website.
(delete-file "tests/testthat/test_mapping_set.R")
;; One test fails with a sorting error.
(delete-file "tests/testthat/test_BiocSet-methods.R"))))))
(propagated-inputs
(list r-annotationdbi
r-biocio
@ -22543,7 +22553,7 @@ analytics on packages.")
r-tibble
r-tidyr))
(native-inputs
(list r-knitr r-testthat))
(list r-gseabase r-knitr r-org-hs-eg-db r-testthat))
(home-page
"https://bioconductor.org/packages/BiocSet")
(synopsis