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gnu: r-rhtslib: Propagate zlib.
* gnu/packages/bioinformatics.scm (r-rhtslib)[inputs]: Move zlib from here... [propagated-inputs]: ...to here. (r-variantannotation, r-rsamtools, r-bamsignals, r-rhdf5, r-methylkit)[inputs]: Remove zlib. * gnu/packages/bioconductor.scm (r-diffbind, r-quasr, r-cytolib, r-ncdfflow, r-flowworkspace, r-seqbias)[inputs]: Remove zlib.
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2 changed files with 1 additions and 24 deletions
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@ -1726,8 +1726,6 @@ signal in the input, that lead to spurious peaks during peak calling.")
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"0irhqsi6rrkrkc7dhwmfpqfd0mnigs17027czcx8vgbrbra4lcvd"))))
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(properties `((upstream-name . "DiffBind")))
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(build-system r-build-system)
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(inputs
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`(("zlib" ,zlib)))
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(propagated-inputs
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`(("r-amap" ,r-amap)
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("r-apeglm" ,r-apeglm)
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@ -5664,8 +5662,6 @@ index.")
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"032m01q34nnmvbhcb2g3pz2fqmgcw5464m74m1m0h7x9bl04a5k8"))))
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(properties `((upstream-name . "QuasR")))
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(build-system r-build-system)
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(inputs
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`(("zlib" ,zlib)))
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)
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("r-biobase" ,r-biobase)
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@ -6049,8 +6045,6 @@ cluster count and membership by stability evidence in unsupervised analysis.")
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(("\\(RHDF5_LIBS\\)" match)
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(string-append match "/libhdf5.a")))
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#t)))))
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(inputs
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`(("zlib" ,zlib)))
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(native-inputs
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`(("r-knitr" ,r-knitr)
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("pkg-config" ,pkg-config)))
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@ -6150,8 +6144,6 @@ change point detection.")
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(("\\(RHDF5_LIBS\\)" match)
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(string-append match "/libhdf5.a")))
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#t)))))
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(inputs
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`(("zlib" ,zlib)))
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(propagated-inputs
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`(("r-bh" ,r-bh)
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("r-biobase" ,r-biobase)
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@ -6332,8 +6324,6 @@ for other R packages to compile and link against.")
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(("\\{h5lib\\}" match)
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(string-append match "/libhdf5.a")))
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#t)))))
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(inputs
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`(("zlib" ,zlib)))
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(propagated-inputs
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`(("r-aws-s3" ,r-aws-s3)
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("r-aws-signature" ,r-aws-signature)
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@ -6997,8 +6987,6 @@ with multiple R processes supported by the package @code{parallel}.")
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`(("r-biostrings" ,r-biostrings)
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("r-genomicranges" ,r-genomicranges)
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("r-rhtslib" ,r-rhtslib)))
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(inputs
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`(("zlib" ,zlib))) ; This comes from rhtslib.
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(home-page "https://bioconductor.org/packages/seqbias/")
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(synopsis "Estimation of per-position bias in high-throughput sequencing data")
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(description
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