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gnu: bamtools: Set rpath via LDFLAGS.

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* gnu/packages/bioinformatics.scm (bamtools): Add a pre-configure phase
  setting $LDFLAGS to set the rpath to $out/lib/bamtools.
This commit is contained in:
Ricardo Wurmus 2015-05-04 11:27:39 +02:00
parent a73956baf4
commit 4702cec246
1 changed files with 11 additions and 1 deletions
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12
gnu/packages/bioinformatics.scm
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@ -62,7 +62,17 @@
(base32 (base32
"1brry29bw2xr2l9pqn240rkqwayg85b8qq78zk2zs6nlspk4d018")))) "1brry29bw2xr2l9pqn240rkqwayg85b8qq78zk2zs6nlspk4d018"))))
(build-system cmake-build-system) (build-system cmake-build-system)
(arguments `(#:tests? #f)) ;no "check" target (arguments
`(#:tests? #f ;no "check" target
#:phases
(modify-phases %standard-phases
(add-before
'configure 'set-ldflags
(lambda* (#:key outputs #:allow-other-keys)
(setenv "LDFLAGS"
(string-append
"-Wl,-rpath="
(assoc-ref outputs "out") "/lib/bamtools")))))))
(inputs `(("zlib" ,zlib))) (inputs `(("zlib" ,zlib)))
(home-page "https://github.com/pezmaster31/bamtools") (home-page "https://github.com/pezmaster31/bamtools")
(synopsis "C++ API and command-line toolkit for working with BAM data") (synopsis "C++ API and command-line toolkit for working with BAM data")