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gnu: python-scipy: Fix build on i686-linux.
* gnu/packages/patches/python-scipy-i686.patch: Add patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python-science.scm (python-scipy): Add phase to apply the patch. Fixes guix/guix#2989 Change-Id: I6c5d807bd2ed23fca6e94b28cb6927c154bde0e8 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
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@ -2185,6 +2185,7 @@ dist_patch_DATA = \
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%D%/packages/patches/python-pytorch-system-libraries.patch \
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%D%/packages/patches/python-pytorch-without-kineto.patch \
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%D%/packages/patches/python-robotframework-sshlibrary-rf5-compat.patch \
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%D%/packages/patches/python-scipy-i686.patch \
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%D%/packages/patches/python-vaex-core-fix-tsl-use.patch \
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%D%/packages/patches/python-vega-datasets-remove-la-riots-code.patch \
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%D%/packages/patches/python-versioneer-guix-support.patch \
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49
gnu/packages/patches/python-scipy-i686.patch
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49
gnu/packages/patches/python-scipy-i686.patch
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@ -0,0 +1,49 @@
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From https://github.com/scipy/scipy/pull/20135
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From 53796772ed735c1564863fc7ca8d902acb628167 Mon Sep 17 00:00:00 2001
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From: Ralf Gommers <ralf.gommers@gmail.com>
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Date: Thu, 22 Feb 2024 09:10:46 +0100
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Subject: [PATCH] MAINT: interpolate: define `F_INT` as `int` rather than
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`npy_int32`
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This fixes an incompatible pointer issue that shows up as a warning in
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Windows CI jobs, and is reported to break the build with GCC 14 on
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Fedora 40 in gh-19993.
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Using `#define F_INT int` is done in several other submodules; this
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was the only instance of using `npy_int32`.
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Closes gh-19993
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---
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scipy/interpolate/src/_fitpackmodule.c | 4 ++--
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scipy/interpolate/src/fitpack.pyf | 2 +-
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2 files changed, 3 insertions(+), 3 deletions(-)
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diff --git a/scipy/interpolate/src/_fitpackmodule.c b/scipy/interpolate/src/_fitpackmodule.c
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index 0e913d1c7e43..dc79b2b28833 100644
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--- a/scipy/interpolate/src/_fitpackmodule.c
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+++ b/scipy/interpolate/src/_fitpackmodule.c
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@@ -28,8 +28,8 @@ static PyObject *fitpack_error;
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#else
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-#define F_INT npy_int32
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-#define F_INT_NPY NPY_INT32
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+#define F_INT int
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+#define F_INT_NPY NPY_INT
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#define F_INT_MAX NPY_MAX_INT32
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#if NPY_BITSOF_SHORT == 32
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#define F_INT_PYFMT "h"
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diff --git a/scipy/interpolate/src/fitpack.pyf b/scipy/interpolate/src/fitpack.pyf
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index 08cb0c141c98..a9535a83f479 100644
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--- a/scipy/interpolate/src/fitpack.pyf
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+++ b/scipy/interpolate/src/fitpack.pyf
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@@ -16,7 +16,7 @@ python module dfitpack ! in
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#ifdef HAVE_ILP64
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typedef npy_int64 F_INT;
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#else
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-typedef npy_int32 F_INT;
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+typedef int F_INT;
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#endif
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static double dmax(double* seq, F_INT len) {
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@ -3108,6 +3108,15 @@ cross-validation.")
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(list
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#:phases
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#~(modify-phases %standard-phases
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#$@(if (target-x86-32?)
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#~((add-after 'unpack 'apply-i686-patch
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(lambda _
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(let ((patch-file
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#$(local-file
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(search-patch "python-scipy-i686.patch"))))
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(invoke "patch" "--force" "-p1" "-i"
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patch-file)))))
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#~())
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(replace 'check
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(lambda* (#:key tests? #:allow-other-keys)
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(when tests?
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