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gnu: packages/astronomy: Adjust inputs.
These changes are cherry picked and squashed from python-team to cover upcoming updates in pyproject-build-system where setuptools and wheel are required on build time. * gnu/packages/astronomy.scm (python-ads, python-asdf-standard, python-asdf-transform-schemas, python-astrodendro, python-bayesicfitting, python-casa-formats-io, python-cdflib, python-cmyt, python-drizzle, python-extinction, python-fitsio, python-hvpy, python-naima, python-pyavm, python-pyerfa, python-pynbody, python-pysiaf, python-pysiril, python-pysynphot, python-sgp4, python-sirilic, python-skyfield, python-soxs, python-spherical-geometry, python-stsci-image) [native-inputs]: Add python-setuptools and python-wheel. (python-jplephem) [inputs]: Remove python-numpy. [propagated-inputs]: Add python-numpy. [native-inputs]: Add python-setuptools and python-wheel. (python-yt): Shift the order of native and propagated inputs, add missing. [native-inputs]: Add python-wheel. (python-yt-astro-analysis): Shift the order of native and propagated inputs, add missing. [native-inputs]: Add python-setuptools and python-wheel. (python-czml3) [native-inputs]: Remove python-astropy; add python-astropy-minimal, python-setuptools, and python-wheel. Change-Id: I3e28b2c7b5503741300dc4f15b63ded988570c63
This commit is contained in:
Sharlatan Hellseher
parent
e881cc5606
commit
5f275bbab0
1 changed files with 163 additions and 67 deletions
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@ -1509,7 +1509,9 @@ model-fitting photometry or morphological analyses.")
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(build-system pyproject-build-system)
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(native-inputs
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(list nss-certs-for-test
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python-httpretty))
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python-httpretty
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-mock
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python-requests
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@ -1766,7 +1768,9 @@ astronomical images, especially when there is no WCS information available.")
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#$(version-major+minor+point version)))))))
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(native-inputs
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(list python-pytest
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python-setuptools-scm))
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-astropy
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python-h5py
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@ -1860,6 +1864,9 @@ mining in astronomy.")
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(lambda* (#:key tests? test-flags #:allow-other-keys)
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(when tests?
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(apply invoke "python" test-flags)))))))
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(native-inputs
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(list python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-astropy
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python-future
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@ -1894,9 +1901,16 @@ Herschel.")
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(lambda _
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(invoke "python" "setup.py" "build_ext" "--inplace"))))))
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(native-inputs
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(list python-pytest python-pytest-cov python-pytest-openfiles))
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(list python-pytest
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python-pytest-cov
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python-pytest-openfiles
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-astropy python-click python-dask python-numpy))
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(list python-astropy
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python-click
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python-dask
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python-numpy))
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(home-page "https://casa-formats-io.readthedocs.io/")
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(synopsis "Dask-based reader for CASA data")
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(description
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@ -1961,10 +1975,16 @@ lens models possibly obtained from different modeling codes.")
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(sha256
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(base32 "0gsdffn5w7j1aridvmx4xh6axvmbmqjwawacc8fnshpcyh4md5pn"))))
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(build-system pyproject-build-system)
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(propagated-inputs
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(list python-attrs python-dateutil python-w3lib))
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(native-inputs
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(list python-astropy python-pytest python-pytest-mypy))
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(list python-astropy-minimal
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python-pytest
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python-pytest-mypy
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-attrs
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python-dateutil
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python-w3lib))
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(home-page "https://github.com/poliastro/czml3")
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(synopsis "Python library to write CZML")
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(description
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@ -2013,8 +2033,13 @@ of dates.")
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(arguments
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(list
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#:test-flags #~(list "test.py")))
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(native-inputs (list python-cython python-pytest))
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(propagated-inputs (list python-numpy))
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(native-inputs
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(list python-cython
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python-pytest
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-numpy))
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(home-page "http://github.com/kbarbary/extinction")
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(synopsis "Fast interstellar dust extinction laws")
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(description
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@ -2058,7 +2083,9 @@ exitinction laws found in the literature.")
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(lambda _
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(invoke "python" "setup.py" "build_ext" "--inplace"))))))
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(native-inputs
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(list python-pytest))
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(list python-pytest
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python-setuptools
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python-wheel))
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(inputs
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(list curl cfitsio zlib))
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(propagated-inputs
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@ -2492,6 +2519,9 @@ position-frequency slice.")
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(build-system pyproject-build-system)
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(arguments
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(list #:tests? #f)) ; no tests
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(native-inputs
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(list python-setuptools
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python-wheel))
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(home-page "https://siril.org/tutorials/pysiril/")
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(synopsis "Python interface to SiriL")
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(description
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@ -2571,7 +2601,9 @@ end products of specific X-ray observatories.")
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(arguments
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(list #:tests? #f)) ; no tests
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(native-inputs
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(list nss-certs-for-test))
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(list nss-certs-for-test
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-requests
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python-wxpython))
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@ -2692,6 +2724,11 @@ to make such analysis both as flexible and clear as possible.")
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;; To address sanity check warning: UserWarning: unable to write
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;; new config file.
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(setenv "HOME" "/tmp"))))))
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(native-inputs
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(list python-cython
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-appdirs
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python-astropy
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@ -2702,9 +2739,6 @@ to make such analysis both as flexible and clear as possible.")
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python-regions
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python-scipy
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python-tqdm))
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(native-inputs
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(list python-cython
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python-setuptools-scm))
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(home-page "https://hea-www.cfa.harvard.edu/soxs/")
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(synopsis "Simulated Observations of X-ray Sources")
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(description
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@ -3399,16 +3433,18 @@ bad pixel tracking throughout the reduction process.")
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(add-before 'check 'set-home-env
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(lambda _
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(setenv "HOME" (getcwd)))))))
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(propagated-inputs
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(list python-numpy))
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(native-inputs
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(list python-astropy
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python-hypothesis
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python-pytest
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python-pytest-cov
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python-pytest-remotedata
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python-setuptools
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python-setuptools-scm
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python-xarray))
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python-xarray
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python-wheel))
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(propagated-inputs
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(list python-numpy))
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(home-page "https://github.com/MAVENSDC/cdflib")
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(synopsis "Python library to deal with NASA's CDF astronmical data format")
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(description "This package provides a Python @acronym{CDF, Computable
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@ -3469,9 +3505,14 @@ attempting to maintain ISTP compliance
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(base32 "1zabmckr1z637pfqqvlkj0asfqqvx2x92163dby8x0c8yiqgdvjb"))))
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(build-system pyproject-build-system)
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(native-inputs
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(list python-colorspacious python-pytest python-pytest-mpl))
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(list python-colorspacious
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python-pytest
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python-pytest-mpl
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-matplotlib python-numpy))
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(list python-matplotlib
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python-numpy))
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(home-page "https://yt-project.org/")
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(synopsis "Matplotlib colormaps from the yt project")
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(description
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@ -3578,10 +3619,14 @@ used with local NetDRMS sites.")
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(lambda _
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;; Cython extensions have to be built before running the tests.
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(invoke "python" "setup.py" "build_ext" "--inplace"))))))
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(propagated-inputs
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(list python-astropy python-numpy))
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(native-inputs
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(list python-pytest python-setuptools-scm))
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(list python-pytest
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-astropy
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python-numpy))
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(home-page "https://github.com/spacetelescope/drizzle")
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(synopsis
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"Astronomical tool for combining dithered images into a single image")
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@ -3630,10 +3675,15 @@ implemented using the astropy.modeling framework.")
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(build-system pyproject-build-system)
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(arguments
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(list #:tests? #f)) ; Requires HTTP(S) access to api.beta.helioviewer.org
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(propagated-inputs
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(list python-pydantic-2 python-pydantic-settings python-requests))
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(native-inputs
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(list python-pytest python-pytest-astropy))
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(list python-pytest
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python-pytest-astropy
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-pydantic-2
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python-pydantic-settings
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python-requests))
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(home-page "https://helioviewer.org/")
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(synopsis "Helioviewer Python API Wrapper")
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(description "@code{hvpy} is a Python API wrapper around the formal
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@ -3772,6 +3822,11 @@ the easy construction of interactive matplotlib widget based animations.")
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(sha256
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(base32 "1lng2prl2kzzpgrkj11hl53cvqdh0gpk8cdqkvcg08k3bivzk8q8"))))
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(build-system pyproject-build-system)
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(native-inputs
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(list python-pytest
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-astropy
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python-corner
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@ -3780,8 +3835,6 @@ the easy construction of interactive matplotlib widget based animations.")
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python-matplotlib
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python-pyyaml
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python-scipy))
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(native-inputs
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(list python-pytest python-setuptools-scm))
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(home-page "http://github.com/zblz/naima")
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(synopsis "Derivation of non-thermal particle distributions through MCMC spectral fitting")
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(description
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@ -4079,10 +4132,15 @@ interest, and which require portability between platforms or ease of scripting."
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(sha256
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(base32 "0vgjqvddq4a5lnmg8msm7fwqs3r6fc748xzvnhyvc387h0z8pdxk"))))
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(build-system pyproject-build-system)
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(propagated-inputs
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(list python-astropy python-numpy))
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(native-inputs
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(list python-pillow python-pytest python-setuptools-scm))
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(list python-pillow
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python-pytest
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-astropy
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python-numpy))
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(home-page "https://astrofrog.github.io/pyavm/")
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(synopsis "Simple pure-python AVM meta-data handling")
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(description
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@ -4306,6 +4364,9 @@ changing the pixel resolution, orientation, coordinate system.")
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(sha256
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(base32 "0aalbmldks6ykgkcxwkvnp04q0avhv903m5zwvg8i7zvl99xrbfq"))))
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(build-system pyproject-build-system)
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(native-inputs
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(list python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-numpy))
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(home-page "https://github.com/brandon-rhodes/python-sgp4")
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@ -4667,7 +4728,9 @@ python_files = test_*.py"))))))))
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(native-inputs
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(list python-pytest
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python-pytest-astropy-header
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python-setuptools-scm))
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(inputs
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(list qd))
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(propagated-inputs
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@ -4753,8 +4816,14 @@ and CAS statistics), as well as fitting 2D Sérsic profiles.")
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(lambda _
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;; Cython extensions have to be built before running the tests.
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(invoke "python" "setup.py" "build_ext" "--inplace"))))))
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(propagated-inputs (list python-numpy python-scipy))
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(native-inputs (list python-pytest python-setuptools-scm))
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(native-inputs
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(list python-pytest
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-numpy
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python-scipy))
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(home-page "https://github.com/spacetelescope/stsci.image")
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(synopsis "Image array manipulation functions")
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(description
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@ -5039,7 +5108,10 @@ packages for HST.")
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(lambda* (#:key tests? #:allow-other-keys)
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(when tests?
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(invoke "python" "-m" "unittest" "discover" "-s" "test")))))))
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(inputs
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(native-inputs
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(list python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-numpy))
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(home-page "https://github.com/brandon-rhodes/python-jplephem")
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(synopsis "Python version of NASA DE4xx ephemerides")
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@ -5203,7 +5275,11 @@ files.")
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(lambda _
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(invoke "python" "setup.py" "build_ext" "--inplace"))))))
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(native-inputs
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(list python-pytest-doctestplus python-pytest python-setuptools-scm))
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(list python-pytest-doctestplus
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python-pytest
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(inputs
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(list erfa))
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(propagated-inputs
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@ -5290,7 +5366,9 @@ functions, so that they can be called with scalar or array inputs.")
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(native-inputs
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(list python-cython
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python-pandas
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python-pytest))
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python-pytest
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python-setuptools
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python-wheel))
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(propagated-inputs
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(list python-h5py
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python-matplotlib
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@ -5377,6 +5455,12 @@ Features:
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;; <https://github.com/spacetelescope/pysiaf/issues/338>
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"-k" (string-append "not test_write_jwst_siaf_xlsx"
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" and not test_write_jwst_siaf_xml" ))))
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(native-inputs
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(list python-pytest
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python-pytest-xdist
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-astropy
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python-lxml
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@ -5385,10 +5469,6 @@ Features:
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python-openpyxl
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python-requests
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python-scipy))
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(native-inputs
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(list python-pytest
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python-pytest-xdist
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python-setuptools-scm))
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(home-page "https://pysiaf.readthedocs.io/")
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(synopsis "Handling SIAF for space telescopes")
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(description
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@ -5430,7 +5510,9 @@ comparison, and validation are provided.")
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(native-inputs
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(list python-pytest
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python-pytest-remotedata
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python-setuptools-scm))
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-astropy
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python-beautifulsoup4
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@ -5687,13 +5769,17 @@ support for reading and writing various compression algorithms including:
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"--ignore=tests/test_integration.py"
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"--ignore=tests/test_manifests.py"
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"--ignore=tests/test_yaml_schema.py")))
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(native-inputs (list python-astropy
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python-jsonschema
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python-pypa-build
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python-pytest
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python-packaging
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python-setuptools-scm))
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(propagated-inputs (list python-importlib-resources))
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(native-inputs
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(list python-astropy
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python-jsonschema
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python-pypa-build
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python-pytest
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python-packaging
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python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-importlib-resources))
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(home-page "https://asdf-standard.readthedocs.io/")
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(synopsis "ASDF standard schemas")
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(description
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@ -5720,8 +5806,13 @@ up-front for extensibility.")
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(arguments
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;; Dependency cycle with python-asdf
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(list #:tests? #f))
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(native-inputs (list python-setuptools-scm))
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(propagated-inputs (list python-asdf-standard python-importlib-resources))
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(native-inputs
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(list python-setuptools
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python-setuptools-scm
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python-wheel))
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(propagated-inputs
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(list python-asdf-standard
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python-importlib-resources))
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(home-page "https://github.com/asdf-format/asdf-transform-schemas")
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(synopsis "ASDF schemas for transforms")
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(description
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@ -6107,7 +6198,9 @@ pipelines.")
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(native-inputs
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(list nss-certs-for-test
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python-assay
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python-pandas))
|
||||
python-pandas
|
||||
python-setuptools
|
||||
python-wheel))
|
||||
(propagated-inputs
|
||||
(list python-certifi
|
||||
python-jplephem
|
||||
|
|
@ -6290,7 +6383,7 @@ using (multivariate) polynomials.")
|
|||
(list
|
||||
#:build-backend "setuptools.build_meta"
|
||||
#:test-flags
|
||||
#~(list "-n" "auto")
|
||||
#~(list "--numprocesses" "auto")
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'relax-requirements
|
||||
|
|
@ -6305,6 +6398,18 @@ using (multivariate) polynomials.")
|
|||
(lambda _
|
||||
(setenv "HOME" "/tmp")
|
||||
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
|
||||
(native-inputs
|
||||
(list python-cython-3
|
||||
python-nose
|
||||
python-nose-exclude
|
||||
python-nose-timer
|
||||
python-pyaml
|
||||
python-pytest
|
||||
python-pytest-mpl
|
||||
python-pytest-xdist
|
||||
python-setuptools
|
||||
python-sympy
|
||||
python-wheel))
|
||||
(propagated-inputs
|
||||
(list python-cmyt
|
||||
python-ewah-bool-utils
|
||||
|
|
@ -6317,17 +6422,6 @@ using (multivariate) polynomials.")
|
|||
python-tomli-w
|
||||
python-tqdm
|
||||
python-unyt))
|
||||
(native-inputs
|
||||
(list python-cython-3
|
||||
python-nose
|
||||
python-nose-exclude
|
||||
python-nose-timer
|
||||
python-pyaml
|
||||
python-pytest
|
||||
python-pytest-mpl
|
||||
python-pytest-xdist
|
||||
python-setuptools
|
||||
python-sympy))
|
||||
(home-page "http://yt-project.org/")
|
||||
(synopsis "Analyzing and visualizing volumetric data framework")
|
||||
(description
|
||||
|
|
@ -6374,15 +6468,17 @@ using (multivariate) polynomials.")
|
|||
(add-before 'check 'build-extensions
|
||||
(lambda _
|
||||
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
|
||||
(native-inputs
|
||||
(list python-cython
|
||||
python-nose
|
||||
python-tomli
|
||||
python-setuptools
|
||||
python-wheel))
|
||||
(propagated-inputs
|
||||
(list python-h5py
|
||||
python-numpy
|
||||
python-packaging
|
||||
python-yt))
|
||||
(native-inputs
|
||||
(list python-cython
|
||||
python-nose
|
||||
python-tomli))
|
||||
(home-page "https://github.com/yt-project/yt_astro_analysis")
|
||||
(synopsis "YT astrophysical analysis modules")
|
||||
(description
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue