diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ec994293758..38575220e78 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -26656,8 +26656,19 @@ approach and a multi-scale contact profile.") (uri (bioconductor-uri "BASiCS" version)) (sha256 (base32 "1pdbkxamzcpgiqycp3dzmakj3laclgj3r9q9garz3q86m59fkrzb")))) - (properties `((upstream-name . "BASiCS"))) + (properties + '((upstream-name . "BASiCS") + (updater-extra-native-inputs . ("r-scrnaseq")))) (build-system r-build-system) + (arguments + (list + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'disable-bad-tests + (lambda _ + (substitute* "tests/testthat/test_misc.R" + ((".*ERCC works.*" m) + (string-append m "skip('guix')\n")))))))) (propagated-inputs (list r-assertthat r-biobase @@ -26681,7 +26692,7 @@ approach and a multi-scale contact profile.") r-singlecellexperiment r-summarizedexperiment r-viridis)) - (native-inputs (list r-knitr r-testthat)) + (native-inputs (list r-knitr r-scrnaseq r-testthat)) (home-page "https://github.com/catavallejos/BASiCS") (synopsis "Bayesian analysis of single-cell sequencing data") (description