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gnu: python-decoupler-py: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (python-decoupler-py): Update to 1.8.0. [arguments] <phases>: Add 'relax-requirements. [native-inputs]: Remove python-wheel; add python-poetry-core. Change-Id: I6ef7548dcbe90c87e049fef12402bcc58f807ce4
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@ -2796,16 +2796,18 @@ parsing of Variant Call Format (VCF) files.")
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(define-public python-decoupler-py
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(package
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(name "python-decoupler-py")
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(version "1.6.0")
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;; Upstream places release on a new branch, see
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;; <https://github.com/saezlab/decoupler-py/issues/175>.
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(version "1.8.0")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/saezlab/decoupler-py")
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(commit (string-append "v" version))))
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1mqkp0i8k5hzhfnka4nc2f0phmrs0k404ynbl1lqfjzywx25y75h"))))
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"0c3yg7jjb1nxb6hsh9wn7wr8w0ba55gixdbf5fp443nhv1cwlajj"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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@ -2821,6 +2823,11 @@ parsing of Variant Call Format (VCF) files.")
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" and not test_get_collectri"))
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#:phases
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'(modify-phases %standard-phases
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(add-after 'unpack 'relax-requirements
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(lambda _
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(substitute* "pyproject.toml"
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;; numba = "^0.60.0"; all tests passed.
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(("0.60.0") "0.61.0"))))
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(add-before 'check 'set-home
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;; Some tests require a home directory to be set.
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(lambda _ (setenv "HOME" "/tmp")))
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@ -2842,7 +2849,7 @@ parsing of Variant Call Format (VCF) files.")
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python-skranger
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python-tqdm
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python-typing-extensions))
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(native-inputs (list python-pytest python-wheel))
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(native-inputs (list python-poetry-core python-pytest))
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(home-page "https://github.com/saezlab/decoupler-py")
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(synopsis
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"Framework for modeling, analyzing and interpreting single-cell RNA-seq data")
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