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gnu: openmpi: Update to 3.0.1.

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* gnu/packages/mpi.scm (openmpi): Update to 3.0.1.
[arguments]: In 'remove-absolute' phase, adjust romio file name.
* gnu/packages/maths.scm (scalapack)[arguments]: Add
'set-test-environment' phase.
(slepc-openmpi)[arguments]: Likewise.
(mumps-openmpi)[arguments]: Likewise.
(superlu-dist)[arguments]: In 'check' phase, set
'OMPI_MCA_plm_rsh_agent'.
(scotch)[arguments]: In 'build-esmumps', likewise.
(p4est)[arguments]: Add 'set-test-environment' phase.
(hypre-openmpi)[arguments]: Likewise.
This commit is contained in:
Ludovic Courtès 2018-05-12 17:53:54 +02:00 • committed by Ludovic Courtès
parent 0921eff2a8
commit 6df2a50ac4
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GPG key ID: 090B11993D9AEBB5
2 changed files with 70 additions and 12 deletions
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gnu/packages/mpi.scm
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@ -153,7 +153,7 @@ bind processes, and much more.")
(define-public openmpi
(package
(name "openmpi")
(version "1.10.7")
(version "3.0.1")
(source
(origin
(method url-fetch)
@ -162,7 +162,7 @@ bind processes, and much more.")
"/downloads/openmpi-" version ".tar.bz2"))
(sha256
(base32
"142s1vny9gllkq336yafxayjgcirj2jv0ddabj879jgya7hyr2d0"))))
"0pbqrm5faf57nasy1s81wqivl7zvxmv8lzjh8hvb0f3qxv8m0d36"))))
(build-system gnu-build-system)
(inputs
`(("hwloc" ,hwloc "lib")
@ -205,8 +205,8 @@ bind processes, and much more.")
(("_ABSOLUTE") ""))
;; Avoid valgrind (which pulls in gdb etc.).
(substitute*
'("./ompi/mca/io/romio/src/io_romio_component.c")
(("MCA_io_romio_COMPLETE_CONFIGURE_FLAGS")
'("./ompi/mca/io/romio314/src/io_romio314_component.c")
(("MCA_io_romio314_COMPLETE_CONFIGURE_FLAGS")
"\"[elided to reduce closure]\""))
#t))
(add-before 'build 'scrub-timestamps ;reproducibility