Merge branch 'master' into staging

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Marius Bakke 2019-06-29 23:23:59 +02:00
commit 6e1f8d552b
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@ -29,7 +29,7 @@
;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016, 2017 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
;;; Copyright © 2016, 2017 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2016, 2017, 2019 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2016, 2017, 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016, 2017, 2018 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2016, 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
@ -60,6 +60,7 @@
;;; Copyright © 2019 Brett Gilio <brettg@posteo.net>
;;; Copyright © 2019 Sam <smbaines8@gmail.com>
;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
@ -88,6 +89,7 @@
#:use-module (gnu packages compression)
#:use-module (gnu packages crypto)
#:use-module (gnu packages databases)
#:use-module (gnu packages dbm)
#:use-module (gnu packages file)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages gcc)
@ -118,6 +120,7 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-check)
#:use-module (gnu packages python-compression)
#:use-module (gnu packages python-crypto)
#:use-module (gnu packages python-web)
#:use-module (gnu packages qt)
@ -2685,7 +2688,7 @@ ecosystem, but can naturally be used also by other projects.")
(define-public python-robotframework
(package
(name "python-robotframework")
(version "3.1.1")
(version "3.1.2")
;; There are no tests in the PyPI archive.
(source
(origin
@ -2695,8 +2698,7 @@ ecosystem, but can naturally be used also by other projects.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1aaiamc9l35m5sf7xl2qc5q9308v7sz3p1qgzcslsjxzddphyn4v"))
(base32 "16gnxy0qinh8fhs0qvhff5z2xh49c3cqgm0d7bfjw120df6x7fym"))
(patches (search-patches
"python-robotframework-honor-source-date-epoch.patch"))))
(build-system python-build-system)
@ -4856,17 +4858,101 @@ them as the version argument or in a SCM managed file.")
(define-public python2-setuptools-scm
(package-with-python2 python-setuptools-scm))
(define-public python-pathlib2
(package
(name "python-pathlib2")
(version "2.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pathlib2" version))
(sha256
(base32
"0hpp92vqqgcd8h92msm9slv161b1q160igjwnkf2ag6cx0c96695"))))
(build-system python-build-system)
(propagated-inputs
`(("python-scandir" ,python-scandir)
("python-six" ,python-six)))
(home-page "https://pypi.python.org/pypi/pathlib2/")
(synopsis "Object-oriented filesystem paths")
(description "The goal of pathlib2 is to provide a backport of the
standard @code{pathlib} module which tracks the standard library module, so
all the newest features of the standard @code{pathlib} can be used also on
older Python versions.")
(license license:expat)))
(define-public python-importlib-metadata
(package
(name "python-importlib-metadata")
(version "0.18")
(source
(origin
(method url-fetch)
(uri (pypi-uri "importlib_metadata" version))
(sha256
(base32
"1nqj6vj2z4byi8flzf2lbldhqgicsz9mkpv4k69kjd8p8qxy4vnb"))))
(build-system python-build-system)
(propagated-inputs
`(("python-configparser" ,python-configparser)
("python-contextlib2" ,python-contextlib2)
("python-docutils" ,python-docutils)
("python-pathlib2" ,python-pathlib2)
("python-rst.linker" ,python-rst.linker)
("python-zipp" ,python-zipp)))
(native-inputs
`(("python-setuptools-scm" ,python-setuptools-scm)
("python-sphinx" ,python-sphinx)))
(home-page "https://importlib-metadata.readthedocs.io/")
(synopsis "Read metadata from Python packages")
(description
"@code{importlib_metadata} is a library which provides an API for
accessing an installed Python package's metadata, such as its entry points or
its top-level name. This functionality intends to replace most uses of
@code{pkg_resources} entry point API and metadata API. Along with
@code{importlib.resources} in Python 3.7 and newer, this can eliminate the
need to use the older and less efficient @code{pkg_resources} package.")
(license license:asl2.0)))
(define-public python-jaraco-packaging
(package
(name "python-jaraco-packaging")
(version "6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.packaging" version))
(sha256
(base32
"0zimrnkh33b9g8ffw11mjh6kvs54cy5gcjw1h5cl1r7dc833dmkm"))))
(build-system python-build-system)
(propagated-inputs
`(("python-pytest" ,python-pytest)
("python-pytest-checkdocs" ,python-pytest-checkdocs)
("python-pytest-flake8" ,python-pytest-flake8)
("python-rst.linker" ,python-rst.linker)
("python-setuptools" ,python-setuptools)
("python-setuptools-scm" ,python-setuptools-scm)
("python-six" ,python-six)
("python-sphinx" ,python-sphinx)))
(home-page "https://github.com/jaraco/jaraco.packaging")
(synopsis "Tools to supplement packaging Python releases")
(description
"This package provides various tools to supplement packaging Python
releases.")
(license license:expat)))
(define-public python-pathpy
(package
(name "python-pathpy")
(version "11.0.1")
(version "11.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "path.py" version))
(sha256
(base32 "07x15v8c7ry9bvycw294c9yq6ky9v2b0dalvgi6rn38ilh69vsz7"))))
;; (outputs '("out" "doc"))
(base32 "1jxkf91syzxlpiwgm83fjfz1m5xh3jrvv4iyl5wjsnkk599pls5n"))))
(outputs '("out" "doc"))
(build-system python-build-system)
(propagated-inputs
`(("python-appdirs" ,python-appdirs)))
@ -4875,26 +4961,31 @@ them as the version argument or in a SCM managed file.")
("python-sphinx" ,python-sphinx)
("python-rst.linker" ,python-rst.linker)
("python-pytest" ,python-pytest)
("python-pytest-runner" ,python-pytest-runner)))
("python-pytest-runner" ,python-pytest-runner)
("python-jaraco-packaging" ,python-jaraco-packaging)))
(arguments
;; FIXME: Documentation and tests require "jaraco.packaging".
`(#:tests? #f))
;; #:phases
;; (modify-phases %standard-phases
;; (add-after 'build 'build-doc
;; (lambda _
;; (setenv "LANG" "en_US.UTF-8")
;; (zero? (system* "python" "setup.py" "build_sphinx"))))
;; (add-after 'install 'install-doc
;; (lambda* (#:key outputs #:allow-other-keys)
;; (let* ((data (string-append (assoc-ref outputs "doc") "/share"))
;; (doc (string-append data "/doc/" ,name "-" ,version))
;; (html (string-append doc "/html")))
;; (mkdir-p html)
;; (for-each (lambda (file)
;; (copy-file file (string-append doc "/" file)))
;; '("README.rst" "CHANGES.rst"))
;; (copy-recursively "build/sphinx/html" html)))))))
`(#:phases
(modify-phases %standard-phases
(add-after 'build 'build-doc
(lambda _
(setenv "LANG" "en_US.UTF-8")
(invoke "python" "setup.py" "build_sphinx")))
(add-after 'install 'install-doc
(lambda* (#:key outputs #:allow-other-keys)
(let* ((data (string-append (assoc-ref outputs "doc") "/share"))
(doc (string-append data "/doc/" ,name "-" ,version))
(html (string-append doc "/html")))
(mkdir-p html)
(for-each (lambda (file)
(copy-file file (string-append doc "/" file)))
'("README.rst" "CHANGES.rst"))
(copy-recursively "build/sphinx/html" html)
#t)))
(replace 'check
(lambda _
;; The import time test aborts if an import takes longer than
;; 100ms. It may very well take a little longer than that.
(invoke "pytest" "-v" "-k" "not test_import_time"))))))
(home-page "https://github.com/jaraco/path.py")
(synopsis "Python module wrapper for built-in os.path")
(description
@ -7930,6 +8021,27 @@ be set via config files and/or environment variables.")
@code{ArgumentParser} object.")
(license license:asl2.0)))
(define-public python-contextlib2
(package
(name "python-contextlib2")
(version "0.5.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "contextlib2" version))
(sha256
(base32
"0j6ad6lwwyc9kv71skj098v5l7x5biyj2hs4lc5x1kcixqcr97sh"))))
(build-system python-build-system)
(home-page "http://contextlib2.readthedocs.org/")
(synopsis "Tools for decorators and context managers")
(description "This module is primarily a backport of the Python
3.2 contextlib to earlier Python versions. Like contextlib, it
provides utilities for common tasks involving decorators and context
managers. It also contains additional features that are not part of
the standard library.")
(license license:psfl)))
(define-public python2-contextlib2
(package
(name "python2-contextlib2")
@ -9746,16 +9858,16 @@ format.")
(define-public python-twisted
(package
(name "python-twisted")
(version "19.2.0")
(version "19.2.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "Twisted" version ".tar.bz2"))
(sha256
(base32
"1gmb8d57s13d8znvqnxi47vqzqz141z443dbxg9wjkp8ia9f220p"))))
"0liymyd4pzphizjlpwkncxjpm9akyr3lkfkm77yfg6wasv108b7s"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Some tests are failing.
'(#:tests? #f)) ; FIXME: some tests fail
(propagated-inputs
`(("python-zope-interface" ,python-zope-interface)
("python-pyhamcrest" ,python-pyhamcrest)
@ -10378,14 +10490,14 @@ etc.")
(define-public python-stem
(package
(name "python-stem")
(version "1.7.0")
(version "1.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "stem" version))
(sha256
(base32
"1awiglfiajnx2hva9aqpj3fmdvdb4qg7cwnlfyih827m68y3cq8v"))))
"18lc95pmc7i089nlsb06dsxyjl5wbhxfqgdxbjcia35ndh8z7sn9"))))
(build-system python-build-system)
(arguments
`(#:phases
@ -13464,6 +13576,37 @@ belong to tagged versions.")
(define-public python2-setuptools-scm-git-archive
(package-with-python2 python-setuptools-scm-git-archive))
(define-public python-setuptools-git
(package
(name "python-setuptools-git")
(version "1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "setuptools-git" version))
(sha256
(base32
"0i84qjwp5m0l9qagdjww2frdh63r37km1c48mrvbmaqsl1ni6r7z"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
;; This is needed for tests.
(add-after 'unpack 'configure-git
(lambda _
(setenv "HOME" "/tmp")
(invoke "git" "config" "--global" "user.email" "guix")
(invoke "git" "config" "--global" "user.name" "guix")
#t)))))
(native-inputs
`(("git" ,git-minimal)))
(home-page "https://github.com/msabramo/setuptools-git")
(synopsis "Setuptools revision control system plugin for Git")
(description
"This package provides a plugin for Setuptools for revision control with
Git.")
(license license:bsd-3)))
(define-public python-pyclipper
(package
(name "python-pyclipper")
@ -14067,6 +14210,51 @@ source bytes using the UTF-8 encoding and then rewrites Python 3.6 style
@code{f} strings.")
(license license:expat)))
(define-public python-typed-ast
(package
(name "python-typed-ast")
(version "1.3.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "typed-ast" version))
(sha256
(base32
"1m7pr6qpana3cvqwiw7mlvrgvmw27ch5mx1592572xhlki8g85ak"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build utils)
(guix build python-build-system)
(ice-9 ftw)
(srfi srfi-1)
(srfi srfi-26))
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(let ((cwd (getcwd)))
(setenv "PYTHONPATH"
(string-append cwd "/build/"
(find (cut string-prefix? "lib" <>)
(scandir (string-append cwd "/build")))
":"
(getenv "PYTHONPATH"))))
(invoke "pytest")
#t)))))
(native-inputs `(("python-pytest" ,python-pytest)))
(home-page "https://github.com/python/typed_ast")
(synopsis "Fork of Python @code{ast} modules with type comment support")
(description "This package provides a parser similar to the standard
@code{ast} library. Unlike @code{ast}, the parsers in @code{typed_ast}
include PEP 484 type comments and are independent of the version of Python
under which they are run. The @code{typed_ast} parsers produce the standard
Python AST (plus type comments), and are both fast and correct, as they are
based on the CPython 2.7 and 3.7 parsers.")
;; See the file "LICENSE" for the details.
(license (list license:psfl
license:asl2.0
license:expat)))) ;ast27/Parser/spark.py
(define-public python-typing
(package
(name "python-typing")
@ -15155,14 +15343,13 @@ append on old values. Partd excels at shuffling operations.")
(define-public python-dask
(package
(name "python-dask")
(version "1.2.0")
(version "1.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dask" version))
(sha256
(base32
"1y0dqcp72ixwblgway0jpvfirlxfcmwrjiivdq96firj1hw127sd"))))
(base32 "0b29gvf96gmp20wicly3v3mhyc93zbm3mdv935fka6x0wax7cy2y"))))
(build-system python-build-system)
;; A single test out of 5000+ fails. This test is marked as xfail when
;; pytest-xdist is used.
@ -15373,16 +15560,15 @@ with the HTTP/2-based RPC framework gRPC.")
(define-public python-astunparse
(package
(name "python-astunparse")
(version "1.6.1")
(version "1.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "astunparse" version))
(sha256
(base32
"1jhidwyrqn17avqh9xnnm3wd7q7aahaq009cba67g86y6gxicyyj"))))
(base32 "0rzbc44xcvzjhhiy7wac96mgal5mcjz1mfq8rmvgswskf4kf9cys"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; there are none
(arguments '(#:tests? #f)) ; there are none
(propagated-inputs
`(("python-six" ,python-six)
("python-wheel" ,python-wheel)))
@ -15610,3 +15796,40 @@ by Igor Pavlov.")
(define-public python2-pylzma
(package-with-python2 python-pylzma))
(define-public python-bsddb3
(package
(name "python-bsddb3")
(version "6.2.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bsddb3" version))
(sha256
(base32
"019db2y6bfmiqbrgg9x9f6h72qjmqh05czdn2v5sy9bl0gs23mj2"))))
(build-system python-build-system)
(inputs
`(("bdb" ,bdb)))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'configure-locations
(lambda* (#:key inputs #:allow-other-keys)
(setenv "BERKELEYDB_DIR" (assoc-ref inputs "bdb"))
(setenv "YES_I_HAVE_THE_RIGHT_TO_USE_THIS_BERKELEY_DB_VERSION" "1")
#t))
(replace 'check
(lambda _
(invoke "python3" "test3.py" "-v"))))))
(home-page "https://www.jcea.es/programacion/pybsddb.htm")
(synopsis "Python bindings for Oracle Berkeley DB")
(description
"This module provides a nearly complete wrapping of the Oracle/Sleepycat
C API for the Database Environment, Database, Cursor, Log Cursor, Sequence and
Transaction objects, and each of these is exposed as a Python type in the
bsddb3.db module. The database objects can use various access methods: btree,
hash, recno, and queue. Complete support of Berkeley DB distributed
transactions. Complete support for Berkeley DB Replication Manager.
Complete support for Berkeley DB Base Replication. Support for RPC.")
(license license:bsd-3)))