mirror of
https://codeberg.org/guix/guix.git
synced 2025-10-02 02:15:12 +00:00
gnu: Add r-kegggraph.
* gnu/packages/bioconductor.scm (r-kegggraph): New variable.
This commit is contained in:
parent
eb2f1a7dd9
commit
7395458d40
1 changed files with 26 additions and 0 deletions
|
@ -9213,3 +9213,29 @@ CATALYST (Cytometry dATa anALYSis Tools) to provide a pipeline for
|
||||||
preprocessing of cytometry data, including i) normalization using bead
|
preprocessing of cytometry data, including i) normalization using bead
|
||||||
standards, ii) single-cell deconvolution, and iii) bead-based compensation.")
|
standards, ii) single-cell deconvolution, and iii) bead-based compensation.")
|
||||||
(license license:gpl2+)))
|
(license license:gpl2+)))
|
||||||
|
|
||||||
|
(define-public r-kegggraph
|
||||||
|
(package
|
||||||
|
(name "r-kegggraph")
|
||||||
|
(version "1.50.0")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "KEGGgraph" version))
|
||||||
|
(sha256
|
||||||
|
(base32 "1h293hn02ysm923bh9gxk87xv663xiqchqcvpaxpla9c3yrgkx2v"))))
|
||||||
|
(properties `((upstream-name . "KEGGgraph")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs
|
||||||
|
`(("r-graph" ,r-graph)
|
||||||
|
("r-rcurl" ,r-rcurl)
|
||||||
|
("r-xml" ,r-xml)))
|
||||||
|
(home-page "https://bioconductor.org/packages/KEGGgraph")
|
||||||
|
(synopsis "Graph approach to Kegg Pathway database in R and Bioconductor")
|
||||||
|
(description
|
||||||
|
"@code{r-kegggraph} is an interface between Kegg Pathway database and graph
|
||||||
|
object as well as a collection of tools to analyze, dissect and visualize these
|
||||||
|
graphs. It parses the regularly updated kgml (Kegg XML) files into graph models
|
||||||
|
maintaining all essential pathway attributes. The package offers
|
||||||
|
functionalities including parsing, graph operation, visualization and etc.")
|
||||||
|
(license license:gpl2+)))
|
||||||
|
|
Loading…
Add table
Add a link
Reference in a new issue