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gnu: python-numba: Update to 0.51.2.

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Fixes <https://issues.guix.gnu.org/43546>.

* gnu/packages/python-xyz.scm (python-numba): Update to 0.51.2.
[arguments]: Remove #:modules.
[phases]{check}: Use add-installed-pythonpath instead of some ad-hoc
solution.  Set HOME.
{remove-failing-tests}: Remove.
[inputs]: Move to...
[native-inputs]: ...here.
This commit is contained in:
Maxim Cournoyer 2020-11-13 22:57:58 -05:00
parent 8a34f29292
commit 7c816ed493
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GPG key ID: 1260E46482E63562
1 changed files with 12 additions and 54 deletions
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gnu/packages/python-xyz.scm
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@ -18691,79 +18691,37 @@ validation testing and application logic.")
(define-public python-numba
(package
(name "python-numba")
(version "0.46.0")
(version "0.51.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "numba" version))
(sha256
(base32
"1vnfzcq6fcnkmdms6114d49awvvj5181fl7z1wlha27qc2paxjy2"))))
"0s0777m8kq4l96i88zj78np7283v1n4878qfc1gvzb8l45bmkg8n"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build utils)
(guix build python-build-system)
(ice-9 ftw)
(srfi srfi-1)
(srfi srfi-26))
#:phases
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'disable-proprietary-features
(lambda _
(setenv "NUMBA_DISABLE_HSA" "1")
(setenv "NUMBA_DISABLE_CUDA" "1")
#t))
(add-after 'unpack 'remove-failing-tests
(lambda _
;; FIXME: These tests fail for unknown reasons:
;; test_non_writable_pycache, test_non_creatable_pycache, and
;; test_frozen (all in numba.tests.test_dispatcher.TestCache).
(substitute* "numba/tests/test_dispatcher.py"
(("def test(_non_writable_pycache)" _ m)
(string-append "def guix_skip" m))
(("def test(_non_creatable_pycache)" _ m)
(string-append "def guix_skip" m))
(("def test(_frozen)" _ m)
(string-append "def guix_skip" m)))
;; These tests fail because we don't run the tests from the build
;; directory: test_setup_py_distutils, test_setup_py_setuptools
;; They are in numba.tests.test_pycc.TestDistutilsSupport.
(substitute* "numba/tests/test_pycc.py"
(("def test(_setup_py_distutils|_setup_py_setuptools)" _ m)
(string-append "def guix_skip" m)))
;; These tests fail because our version of Python does not have
;; a recognizable front-end for the Numba distribution to use
;; to check against.
(substitute* "numba/tests/test_entrypoints.py"
(("def test(_init_entrypoint)" _ m)
(string-append "def guix_skip" m)))
(substitute* "numba/tests/test_jitclasses.py"
(("def test(_jitclass_longlabel_not_truncated)" _ m)
(string-append "def guix_skip" m)))
#t))
(replace 'check
(lambda _
(let ((cwd (getcwd)))
(setenv "PYTHONPATH"
(string-append cwd "/build/"
(find (cut string-prefix? "lib" <>)
(scandir (string-append cwd "/build")))
":"
(getenv "PYTHONPATH")))
;; Something is wrong with the PYTHONPATH when running the
;; tests from the build directory, as it complains about not being
;; able to import certain modules.
(with-directory-excursion "/tmp"
(invoke "python3" "-m" "numba.runtests" "-v" "-m")))
#t)))))
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
;; Something is wrong with the PYTHONPATH when running the
;; tests from the build directory, as it complains about not being
;; able to import certain modules.
(with-directory-excursion "/tmp"
(setenv "HOME" (getcwd))
(invoke "python3" "-m" "numba.runtests" "-v" "-m")))))))
(propagated-inputs
`(("python-llvmlite" ,python-llvmlite)
("python-numpy" ,python-numpy)
("python-singledispatch" ,python-singledispatch)))
;; Needed for tests.
(inputs
(native-inputs ;for tests
`(("python-jinja2" ,python-jinja2)
("python-pygments" ,python-pygments)))
(home-page "https://numba.pydata.org")