amaharaneko/guix-mirrors
1
1
Fork 0
mirror of https://codeberg.org/guix/guix.git synced 2025-10-02 02:15:12 +00:00
Code Issues Projects Releases Packages Wiki Activity Actions

Merge branch 'staging' into core-updates

Browse source
This commit is contained in:
Marius Bakke 2019-03-23 23:16:55 +01:00
commit 8c14f7f8a7
No known key found for this signature in database
GPG key ID: A2A06DF2A33A54FA
219 changed files with 9962 additions and 3896 deletions
Download patch file Download diff file Expand all files Collapse all files

208
gnu/packages/python-xyz.scm
View file

@ -23,7 +23,7 @@
;;; Copyright © 2016 Daniel Pimentel <d4n1@d4n1.org>
;;; Copyright © 2016 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2016, 2017 Troy Sankey <sankeytms@gmail.com>
;;; Copyright © 2016, 2017 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2016, 2017 ng0 <ng0@n0.is>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com>
@ -54,10 +54,11 @@
;;; Copyright © 2018 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
;;; Copyright © 2018 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2018, 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2018 Luther Thompson <lutheroto@gmail.com>
;;; Copyright © 2018 Vagrant Cascadian <vagrant@debian.org>
;;; Copyright © 2019 Brett Gilio <brettg@posteo.net>
;;; Copyright © 2019 Sam <smbaines8@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -142,6 +143,7 @@
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix hg-download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
@ -229,6 +231,28 @@ pidof, tty, taskset, pmap.")
planar geometric objects. It is based on the @code{GEOS} library.")
(license license:bsd-3)))
(define-public python-shortuuid
(package
(name "python-shortuuid")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "shortuuid" version))
(sha256
(base32
"1f8i4zwj5vmpzbz6b17bljy4399gx5aq7vsyw63sz2qgyjcd73yh"))))
(build-system python-build-system)
(native-inputs
`(("python-pep8" ,python-pep8)))
(home-page "https://github.com/skorokithakis/shortuuid")
(synopsis "Generator library for concise, unambiguous and URL-safe UUIDs")
(description
"@code{shortuuid} is a Python library for generating concise, unambiguous
and URL-safe UUIDs. UUIDs are generated using the built-in Python @code{uuid}
module and then similar looking characters are removed.")
(license license:bsd-3)))
(define-public python-logwrap
(package
(name "python-logwrap")
@ -839,6 +863,73 @@ messages in color.")
(define-public python2-coloredlogs
(package-with-python2 python-coloredlogs))
(define-public python-et-xmlfile
(package
(name "python-et-xmlfile")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "et_xmlfile" version))
(sha256
(base32
"0nrkhcb6jdrlb6pwkvd4rycw34y3s931hjf409ij9xkjsli9fkb1"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest"))))))
(native-inputs
`(("python-pytest" ,python-pytest)
("python-lxml" ,python-lxml))) ;used for the tests
(home-page "https://bitbucket.org/openpyxl/et_xmlfile")
(synopsis "Low memory implementation of @code{lxml.xmlfile}")
(description "This Python library is based upon the @code{xmlfile} module
from @code{lxml}. It aims to provide a low memory, compatible implementation
of @code{xmlfile}.")
(license license:expat)))
(define-public python2-et-xmlfile
(package-with-python2 python-et-xmlfile))
(define-public python-openpyxl
(package
(name "python-openpyxl")
(version "2.6.0")
(source
(origin
;; We use the upstream repository, as the tests are not included in the
;; PyPI releases.
(method hg-fetch)
(uri (hg-reference
(url "https://bitbucket.org/openpyxl/openpyxl")
(changeset version)))
(file-name (string-append name "-" version "-checkout"))
(sha256
(base32
"1x47ngn7ybaqdbvg90c8h2x0j6yfdfj25gjfinp2w5rf62gsany7"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest"))))))
(native-inputs
;; For the test suite.
`(("python-lxml" ,python-lxml)
("python-pillow" ,python-pillow)
("python-pytest" ,python-pytest)))
(propagated-inputs
`(("python-et-xmlfile" ,python-et-xmlfile)
("python-jdcal" ,python-jdcal)))
(home-page "https://openpyxl.readthedocs.io")
(synopsis "Python library to read/write Excel 2010 XLSX/XLSM files")
(description "This Python library allows reading and writing to the Excel XLSX, XLSM,
XLTX and XLTM file formats that are defined by the Office Open XML (OOXML)
standard.")
(license license:expat)))
(define-public python-eventlet
(package
(name "python-eventlet")
@ -950,13 +1041,13 @@ human-friendly syntax.")
(define-public python-pandas
(package
(name "python-pandas")
(version "0.23.4")
(version "0.24.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pandas" version))
(sha256
(base32 "1x54pd7hr3y7qahx6b5bf2wzj54xvl8r3s1h4pl254pnmi3wl92v"))))
(base32 "18imlm8xbhcbwy4wa957a1fkamrcb0z988z006jpfda3ki09z4ag"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build utils)
@ -964,6 +1055,13 @@ human-friendly syntax.")
(ice-9 ftw)
(srfi srfi-26))
#:phases (modify-phases %standard-phases
(add-after 'unpack 'patch-which
(lambda* (#:key inputs #:allow-other-keys)
(let ((which (assoc-ref inputs "which")))
(substitute* "pandas/io/clipboard/__init__.py"
(("^CHECK_CMD = .*")
(string-append "CHECK_CMD = \"" which "\"\n"))))
#t))
(replace 'check
(lambda _
(let ((build-directory
@ -972,17 +1070,17 @@ human-friendly syntax.")
(car (scandir "build"
(cut string-prefix? "lib." <>))))))
;; Disable the "strict data files" option which causes
;; the build to error out if required data files are not
;; available (as is the case with PyPI archives).
;; the build to error out if required data files are
;; not available (as is the case with PyPI archives).
(substitute* "setup.cfg"
(("addopts = --strict-data-files") "addopts = "))
(with-directory-excursion build-directory
;; Delete tests that require "moto" which is not yet in Guix.
;; Delete tests that require "moto" which is not yet
;; in Guix.
(for-each delete-file
'("pandas/tests/io/conftest.py"
"pandas/tests/io/json/test_compression.py"
"pandas/tests/io/parser/test_network.py"
"pandas/tests/io/test_excel.py"
"pandas/tests/io/test_parquet.py"))
(invoke "pytest" "-vv" "pandas" "--skip-slow"
"--skip-network" "-k"
@ -990,15 +1088,20 @@ human-friendly syntax.")
"not test_read_s3_jsonl"))))))))
(propagated-inputs
`(("python-numpy" ,python-numpy)
("python-openpyxl" ,python-openpyxl)
("python-pytz" ,python-pytz)
("python-dateutil" ,python-dateutil)))
("python-dateutil" ,python-dateutil)
("python-xlrd" ,python-xlrd)))
(inputs
`(("which" ,which)))
(native-inputs
`(("python-cython" ,python-cython)
("python-beautifulsoup4" ,python-beautifulsoup4)
("python-lxml" ,python-lxml)
("python-html5lib" ,python-html5lib)
("python-nose" ,python-nose)
("python-pytest" ,python-pytest)))
("python-pytest" ,python-pytest)
("python-pytest-mock" ,python-pytest-mock)))
(home-page "https://pandas.pydata.org")
(synopsis "Data structures for data analysis, time series, and statistics")
(description
@ -1765,6 +1868,34 @@ version numbers.")
(define-public python2-vcversioner
(package-with-python2 python-vcversioner))
(define-public python-jdcal
(package
(name "python-jdcal")
(version "1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jdcal" version))
(sha256
(base32
"1ja6j2xq97bsl6rv09mhdx7n0xnrsfx0mj5xqza0mxghqmkm02pa"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest"))))))
(native-inputs
`(("python-pytest" ,python-pytest)))
(home-page "https://github.com/phn/jdcal")
(synopsis "Functions to convert between Julian dates Gregorian dates")
(description "This Python library provides functions for converting
between Julian dates and Gregorian dates.")
(license license:bsd-2)))
(define-public python2-jdcal
(package-with-python2 python-jdcal))
(define-public python-jsonschema
(package
(name "python-jsonschema")
@ -2641,14 +2772,14 @@ Server (PLS).")
(define-public python-language-server
(package
(name "python-language-server")
(version "0.24.0")
(version "0.25.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-language-server" version))
(sha256
(base32
"05zmv6jr7qbgnkz0lqh5pr7kr4lm12i8ljm2k5h5kz3q9m8d4mm0"))))
"1xabnaqd4n72myrc3mxl2y33vr2p7c9c5a87n77p9k327ckvdx01"))))
(build-system python-build-system)
(propagated-inputs
`(("python-pluggy" ,python-pluggy)
@ -2660,7 +2791,8 @@ Server (PLS).")
("python-pycodestyle" ,python-pycodestyle)
("python-mccabe" ,python-mccabe)
("python-rope" ,python-rope)
("python-autopep8" ,python-autopep8)))
("python-autopep8" ,python-autopep8)
("python-pylint" ,python-pylint)))
(home-page "https://github.com/palantir/python-language-server")
(synopsis "Python implementation of the Language Server Protocol")
(description
@ -3393,13 +3525,14 @@ To address this and enable easy cycling over arbitrary @code{kwargs}, the
(name "python-colorspacious")
(version "1.1.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/njsmith/colorspacious/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version))
(sha256
(base32 "1vflh5jm32qb0skza2i8pjacv09w6gq84fqpp2nj77s0rbmzgr4k"))))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/njsmith/colorspacious.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0g0lxqiscy5g5rq9421vv7abg0c90jzy0zmas2z3hya6k2dr5aid"))))
(build-system python-build-system)
(propagated-inputs
`(("python-numpy" ,python-numpy)))
@ -13205,14 +13338,13 @@ such as figshare or Zenodo.")
(define-public python-pyro4
(package
(name "python-pyro4")
(version "4.74")
(version "4.75")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pyro4" version))
(sha256
(base32
"0pzp7c6q3vvkxq0wy9lr6wd5wky40sajz69g697i5rb2q497pvc9"))))
(base32 "1dfpp36imddx19yv0kd28gk1l71ckhpqy6jd590wpm2680jw15rq"))))
(build-system python-build-system)
(propagated-inputs
`(("python-serpent" ,python-serpent)))
@ -13875,14 +14007,13 @@ working with iterables.")
(define-public python-latexcodec
(package
(name "python-latexcodec")
(version "1.0.5")
(version "1.0.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "latexcodec" version))
(sha256
(base32
"0zdd1gf24i83ykadx0y30n3001j43scqr2saql3vckk5c39dj1wn"))))
(base32 "0s4wdbg0w2l8pj3i0y4510i0s04p8nhxcsa2z41bjsv0k66npb81"))))
(build-system python-build-system)
(inputs
`(("python-six" ,python-six)))
@ -14936,14 +15067,13 @@ distribution.")
(define-public python-gast
(package
(name "python-gast")
(version "0.2.0")
(version "0.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gast" version))
(sha256
(base32
"0c296xm1vz9x4w4inmdl0k8mnc0i9arw94si2i7pglpc461r0s3h"))))
(base32 "1w5dzdb3gpcfmd2s0b93d8gff40a1s41rv31458z14inb3s9v4zy"))))
(build-system python-build-system)
(propagated-inputs
`(("python-astunparse" ,python-astunparse)))
@ -15087,3 +15217,23 @@ and dates in \"human readable\" forms. For example, it would display
(description "Txaio provides a compatibility layer between the Python
@code{asyncio} module and @code{Twisted}.")
(license license:expat)))
(define-public python-toolshed
(package
(name "python-toolshed")
(version "0.4.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "toolshed" version))
(sha256
(base32
"14zvz51gzf9i1i3d1sj363ba4rksl6lcf4lz1arl8hpqgcbir8r3"))))
(build-system python-build-system)
(native-inputs
`(("python-nose" ,python-nose)))
(home-page "https://github.com/brentp/toolshed/")
(synopsis "Collection of modules and functions for working with data")
(description "This is a collection of well-tested, simple modules and
functions that aim to reduce boilerplate when working with data.")
(license license:bsd-2)))