amaharaneko/guix-mirrors
1
1
Fork 0
mirror of https://codeberg.org/guix/guix.git synced 2025-10-02 02:15:12 +00:00
Code Issues Projects Releases Packages Wiki Activity Actions

Merge branch 'master' into core-updates

Browse source 
Conflicts:
	gnu/local.mk
	gnu/packages/algebra.scm
	gnu/packages/bioinformatics.scm
	gnu/packages/curl.scm
	gnu/packages/docbook.scm
	gnu/packages/emacs-xyz.scm
	gnu/packages/maths.scm
	gnu/packages/plotutils.scm
	gnu/packages/python-web.scm
	gnu/packages/python-xyz.scm
	gnu/packages/radio.scm
	gnu/packages/readline.scm
	gnu/packages/tls.scm
	gnu/packages/xml.scm
	gnu/packages/xorg.scm
This commit is contained in:
Marius Bakke 2021-06-06 21:16:32 +02:00
commit 8d59c262ad
No known key found for this signature in database
GPG key ID: A2A06DF2A33A54FA
176 changed files with 16041 additions and 6439 deletions
Download patch file Download diff file Expand all files Collapse all files

56
gnu/packages/sphinx.scm
View file

@ -15,6 +15,7 @@
;;; Copyright © 2019 Brett Gilio <brettg@gnu.org>
;;; Copyright © 2020 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2021 Eric Bavier <bavier@posteo.net>
;;; Copyright © 2021 Vinicius Monego <monego@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
@ -409,34 +410,46 @@ integrate Sphinx documents in web templates and to handle searches.")
(define-public python-sphinx-gallery
(package
(name "python-sphinx-gallery")
(version "0.1.13")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sphinx-gallery/sphinx-gallery")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"14nbqh9krx2l2y2ylbln6l6w8iak3wac1lngvaf278y1cx7685kg"))))
(version "0.9.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sphinx-gallery" version))
(sha256
(base32 "14zyhr7m92nafhhnzfvnbgkf5m91krd9mjyi24zn59bjq6zyr8hl"))))
(build-system python-build-system)
(arguments
;; FIXME: Tests attempt to download <https://docs.python.org/3/objects.inv>,
;; <https://docs.scipy.org/doc/numpy/objects.inv>, and
;; <https://matplotlib.org/objects.inv>.
`(#:tests? #f))
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'writable-files-for-tests
(lambda _
(for-each make-file-writable (find-files "."))))
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "-m" "pytest" "--pyargs" "sphinx_gallery" "-k"
(string-append
;; These tests require online data.
"not test_embed_code_links_get_data"
" and not test_run_sphinx"
;; AssertionError.
" and not test_embed_links_and_styles"))))))))
(native-inputs
`(("python-pytest-runner" ,python-pytest-runner)))
(home-page "https://sphinx-gallery.github.io/")
`(("python-joblib" ,python-joblib)
("python-matplotlib" ,python-matplotlib)
("python-numpy" ,python-numpy)
("python-pillow" ,python-pillow)
("python-pytest" ,python-pytest)
("python-pytest-cov" ,python-pytest-cov)
("python-sphinx" ,python-sphinx)))
(home-page "https://sphinx-gallery.github.io/stable/index.html")
(synopsis "Generate an examples gallery automatically")
(description
"@code{sphinx_gallery} is a Sphinx extension that builds an HTML version
from any set of Python scripts and puts it into an examples gallery.")
(license license:bsd-3)))
(define-public python2-sphinx-gallery
(package-with-python2 python-sphinx-gallery))
(define-public python-sphinx-me
(package
(name "python-sphinx-me")
@ -606,18 +619,17 @@ and several other projects.")
(define-public python-breathe
(package
(name "python-breathe")
(version "4.22.1")
(version "4.30.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "breathe" version))
(sha256
(base32
"0snk538xv60z4vfhl3f7v5g658za7257hddkg07cknkn33k6cjvf"))))
"055h95fkdld7s49878fqjx1nri1drj1czc184vrb7i60mf2yqg9n"))))
(build-system python-build-system)
(propagated-inputs
`(("python-docutils" ,python-docutils)
("python-six" ,python-six)
("python-sphinx" ,python-sphinx)))
(home-page "https://github.com/michaeljones/breathe")
(synopsis "ReStructuredText and Sphinx bridge to Doxygen")