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gnu: r-mosdef: Add missing inputs.

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* gnu/packages/bioconductor.scm (r-mosdef)[native-inputs]: Add r-macrophage
and r-org-hs-eg-db.
[properties]: Tell updater to ignore r-pcaexplorer.

Change-Id: I27258d7119cbe5de244c2db6d91ec8c5b0bd0975
This commit is contained in:
Ricardo Wurmus 2024-11-28 12:56:30 +01:00
parent 587ec117f4
commit 8dcf48ab94
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GPG key ID: 197A5888235FACAC
1 changed files with 5 additions and 2 deletions
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gnu/packages/bioconductor.scm
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@ -10515,7 +10515,10 @@ location information (and the reverse operation) is implemented as well.")
(uri (bioconductor-uri "mosdef" version)) (uri (bioconductor-uri "mosdef" version))
(sha256 (sha256
(base32 "0y2hniyb1y5hxlsm339059kb4n3l21fzb3xx112igsbk7zd0r258")))) (base32 "0y2hniyb1y5hxlsm339059kb4n3l21fzb3xx112igsbk7zd0r258"))))
(properties `((upstream-name . "mosdef"))) (properties
`((upstream-name . "mosdef")
;; Avoid dependency cycle.
(updater-ignored-native-inputs . ("r-pcaexplorer"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (list r-annotationdbi (propagated-inputs (list r-annotationdbi
r-clusterprofiler r-clusterprofiler
@ -10533,7 +10536,7 @@ location information (and the reverse operation) is implemented as well.")
r-scales r-scales
r-summarizedexperiment r-summarizedexperiment
r-topgo)) r-topgo))
(native-inputs (list r-knitr r-testthat)) (native-inputs (list r-knitr r-macrophage r-org-hs-eg-db r-testthat))
(home-page "https://github.com/imbeimainz/mosdef") (home-page "https://github.com/imbeimainz/mosdef")
(synopsis "Frequently used and useful differential expression functions") (synopsis "Frequently used and useful differential expression functions")
(description (description