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gnu: python-jupyter-core: Update to 5.7.2.

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* gnu/packages/python-xyz.scm (python-jupyter-core): Update to 5.7.2.
[native-inputs]: Add python-hatchling, python-pre-commit, python-pytest-cov,
and python-pytest-timeout.
[propagated-inputs]: Add python-platformdirs.
[build-system]: Use pyproject-build-system.
[arguments]: Use #:test-flags instead of custom 'check phase; remove phase
'patch-testsuite; disable a few tests; add phase 'pre-check.

Change-Id: I5f415688d17de1c6b4581a0b339359f7efee68c5
This commit is contained in:
Ricardo Wurmus 2024-05-06 22:51:54 +02:00 • committed by Sharlatan Hellseher
parent 69d1d74c9d
commit a318906821
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GPG key ID: 76D727BFF62CD2B5
1 changed files with 34 additions and 31 deletions
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gnu/packages/python-xyz.scm
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@ -12710,39 +12710,38 @@ container data structures in Python).")
(define-public python-jupyter-core (define-public python-jupyter-core
(package (package
(name "python-jupyter-core") (name "python-jupyter-core")
(version "4.10.0") (version "5.7.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append (pypi-uri "jupyter_core" version))) (uri (string-append (pypi-uri "jupyter_core" version)))
(sha256 (sha256
(base32 (base32
"1v0s31rmwppdmww135hif03hy164j9kimirh24kxfcbvdfql9pm6")))) "1n9nyp1skljbbkqp4j7mnihnyp83j9rxm5h4hfn33d7npcr8spxa"))))
(build-system python-build-system) (build-system pyproject-build-system)
(arguments (arguments
`(#:phases (list
(modify-phases %standard-phases #:test-flags
(replace 'check '(list "-k"
(lambda* (#:key tests? #:allow-other-keys) (string-append
(when tests? ;; XXX: These tests fail with "ModuleNotFoundError: No
;; Some tests write to $HOME. ;; module named 'jupyter_core'".
(setenv "HOME" "/tmp") "not test_argv0"
(invoke "pytest" "-vv" " and not test_path_priority "
"-k" " and not test_not_on_path"
(string-append
;; XXX: These tests fail with "ModuleNotFoundError: No ;; These fail with: An incompatible sibling of 'AsyncTornadoApp'
;; module named 'jupyter_core'". ;; is already instantiated as singleton: SyncTornadoApp
"not test_argv0 and not test_path_priority " " and not test_async_app"
"and not test_not_on_path"))))) " and not test_async_tornado_app"
(add-after 'unpack 'patch-testsuite
(lambda _ ;; Fails with a deprecation warning
;; test_not_on_path() and test_path_priority() try to run a test " and not test_sync_tornado_run"))
;; that loads jupyter_core, so we need GUIX_PYTHONPATH #:phases
(substitute* "jupyter_core/tests/test_command.py" '(modify-phases %standard-phases
(("env = \\{'PATH': ''\\}") (add-before 'check 'pre-check
"env = {'PATH': '', 'PYTHONPATH': os.environ['GUIX_PYTHONPATH']}") ;; Some tests write to $HOME.
(("env = \\{'PATH': str\\(b\\)\\}") (lambda _ (setenv "HOME" "/tmp")))
"env = {'PATH': str(b), 'PYTHONPATH': os.environ['GUIX_PYTHONPATH']}"))))
;; Migration is running whenever etc/jupyter exists, but the ;; Migration is running whenever etc/jupyter exists, but the
;; Guix-managed directory will never contain any migratable IPython ;; Guix-managed directory will never contain any migratable IPython
;; config files and cannot be written to anyway, so just pretend we ;; config files and cannot be written to anyway, so just pretend we
@ -12751,11 +12750,15 @@ container data structures in Python).")
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
(mkdir-p (string-append (assoc-ref outputs "out") "/etc/jupyter")) (mkdir-p (string-append (assoc-ref outputs "out") "/etc/jupyter"))
(invoke "touch" (invoke "touch"
(string-append (string-append
(assoc-ref outputs "out") (assoc-ref outputs "out")
"/etc/jupyter/migrated"))))))) "/etc/jupyter/migrated")))))))
(propagated-inputs (list python-traitlets)) (propagated-inputs (list python-platformdirs python-traitlets))
(native-inputs (list python-pytest)) (native-inputs (list python-hatchling
python-pre-commit
python-pytest
python-pytest-cov
python-pytest-timeout))
;; This package provides the `jupyter` binary and thus also exports the ;; This package provides the `jupyter` binary and thus also exports the
;; search paths. ;; search paths.
(native-search-paths (native-search-paths