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gnu: r-flowworkspace: Update to 4.0.3.

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* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.0.3.
[propagated-inputs]: Remove r-flowviz, r-gridextra, and r-rcolorbrewer; add
r-ggplot2, r-rcpparmadillo, r-rhdf5lib, and r-xml.
[native-inputs]: Add r-knitr.
This commit is contained in:
Ricardo Wurmus 2020-06-13 01:01:29 +02:00
parent bafade83c1
commit a9af09df17
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1 changed files with 9 additions and 6 deletions
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gnu/packages/bioconductor.scm
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@ -6117,14 +6117,14 @@ for other R packages to compile and link against.")
(define-public r-flowworkspace (define-public r-flowworkspace
(package (package
(name "r-flowworkspace") (name "r-flowworkspace")
(version "3.34.1") (version "4.0.3")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "flowWorkspace" version)) (uri (bioconductor-uri "flowWorkspace" version))
(sha256 (sha256
(base32 (base32
"1ijbc6z9ljhrw3cqr02smgplhrfg44gzrb1dq4gbrpq3nj4khhpn")))) "1fi76m6r5x4w390996989rignffdzl11k3prpimpwjd3566c276w"))))
(properties `((upstream-name . "flowWorkspace"))) (properties `((upstream-name . "flowWorkspace")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -6136,21 +6136,24 @@ for other R packages to compile and link against.")
("r-digest" ,r-digest) ("r-digest" ,r-digest)
("r-dplyr" ,r-dplyr) ("r-dplyr" ,r-dplyr)
("r-flowcore" ,r-flowcore) ("r-flowcore" ,r-flowcore)
("r-flowviz" ,r-flowviz) ("r-ggplot2" ,r-ggplot2)
("r-graph" ,r-graph) ("r-graph" ,r-graph)
("r-gridextra" ,r-gridextra)
("r-lattice" ,r-lattice) ("r-lattice" ,r-lattice)
("r-latticeextra" ,r-latticeextra) ("r-latticeextra" ,r-latticeextra)
("r-matrixstats" ,r-matrixstats) ("r-matrixstats" ,r-matrixstats)
("r-ncdfflow" ,r-ncdfflow) ("r-ncdfflow" ,r-ncdfflow)
("r-rbgl" ,r-rbgl) ("r-rbgl" ,r-rbgl)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rcpp" ,r-rcpp) ("r-rcpp" ,r-rcpp)
("r-rcpparmadillo" ,r-rcpparmadillo)
("r-rcppparallel" ,r-rcppparallel) ("r-rcppparallel" ,r-rcppparallel)
("r-rgraphviz" ,r-rgraphviz) ("r-rgraphviz" ,r-rgraphviz)
("r-rhdf5lib" ,r-rhdf5lib)
("r-rprotobuflib" ,r-rprotobuflib) ("r-rprotobuflib" ,r-rprotobuflib)
("r-scales" ,r-scales) ("r-scales" ,r-scales)
("r-stringr" ,r-stringr))) ("r-stringr" ,r-stringr)
("r-xml" ,r-xml)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/flowWorkspace/") (home-page "https://bioconductor.org/packages/flowWorkspace/")
(synopsis "Infrastructure for working with cytometry data") (synopsis "Infrastructure for working with cytometry data")
(description (description