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gnu: Add r-music.
* gnu/packages/bioinformatics.scm (r-music): New variable. Change-Id: I3cf73fcb58f9a407d2795a4525038ab00d1b523f
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@ -13276,6 +13276,38 @@ The generated output can be graphically summarized using the built-in plotting
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function.")
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(license license:gpl2))))
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(define-public r-music
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(let ((commit "f21fe67f5670d5e9fca0ad7550abaae3423eb59c")
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(revision "2"))
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(package
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(name "r-music")
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(version (git-version "1.0.0" revision commit))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/xuranw/MuSiC")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "05q72sml35sw3rd0lyg7r9r3470q47x5dsjn4bpgzl99s5d76llx"))))
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(properties `((upstream-name . "MuSiC")))
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(build-system r-build-system)
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(propagated-inputs (list r-biobase
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r-ggplot2
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r-matrix
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r-mcmcpack
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r-nnls
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r-singlecellexperiment
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r-toast))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/xuranw/MuSiC")
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(synopsis "Multi-subject single cell deconvolution")
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(description
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"MuSiC is a deconvolution method that utilizes cross-subject scRNA-seq
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to estimate cell type proportions in bulk RNA-seq data.")
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(license license:gpl3+))))
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(define-public r-sleuth
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(package
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(name "r-sleuth")
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