gnu: Add r-music.

* gnu/packages/bioinformatics.scm (r-music): New variable.

Change-Id: I3cf73fcb58f9a407d2795a4525038ab00d1b523f
This commit is contained in:
Ricardo Wurmus 2025-02-07 10:24:32 +01:00
parent 2a4bba2249
commit abfd703c4e
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@ -13276,6 +13276,38 @@ The generated output can be graphically summarized using the built-in plotting
function.")
(license license:gpl2))))
(define-public r-music
(let ((commit "f21fe67f5670d5e9fca0ad7550abaae3423eb59c")
(revision "2"))
(package
(name "r-music")
(version (git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/xuranw/MuSiC")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "05q72sml35sw3rd0lyg7r9r3470q47x5dsjn4bpgzl99s5d76llx"))))
(properties `((upstream-name . "MuSiC")))
(build-system r-build-system)
(propagated-inputs (list r-biobase
r-ggplot2
r-matrix
r-mcmcpack
r-nnls
r-singlecellexperiment
r-toast))
(native-inputs (list r-knitr))
(home-page "https://github.com/xuranw/MuSiC")
(synopsis "Multi-subject single cell deconvolution")
(description
"MuSiC is a deconvolution method that utilizes cross-subject scRNA-seq
to estimate cell type proportions in bulk RNA-seq data.")
(license license:gpl3+))))
(define-public r-sleuth
(package
(name "r-sleuth")