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Merge branch 'master' into core-updates

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Mark H Weaver 2018-03-20 14:22:06 -04:00
commit ac21be848a
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109 changed files with 737 additions and 326 deletions
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11
gnu/packages/bioinformatics.scm
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@ -12681,7 +12681,7 @@ once. This package provides tools to perform Drop-seq analyses.")
(define-public pigx-rnaseq
(package
(name "pigx-rnaseq")
(version "0.0.2")
(version "0.0.3")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_rnaseq/"
@ -12689,7 +12689,7 @@ once. This package provides tools to perform Drop-seq analyses.")
"/pigx_rnaseq-" version ".tar.gz"))
(sha256
(base32
"168hx2ig3rarphx3l21ay9yyg8ipaakzixnrhpbdi0sknhyvrrk8"))))
"0pz080k4ajlc4rlznkn3najy2a6874gb56rf9g4ag9wqz31q174j"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-tests? #f ; not supported
@ -12711,7 +12711,8 @@ once. This package provides tools to perform Drop-seq analyses.")
`("PYTHONPATH" ":" = (,(getenv "PYTHONPATH")))))
#t)))))
(inputs
`(("snakemake" ,snakemake)
`(("gzip" ,gzip)
("snakemake" ,snakemake)
("fastqc" ,fastqc)
("multiqc" ,multiqc)
("star" ,star)
@ -12825,7 +12826,7 @@ in an easily configurable manner.")
(define-public pigx-bsseq
(package
(name "pigx-bsseq")
(version "0.0.7")
(version "0.0.8")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_bsseq/"
@ -12833,7 +12834,7 @@ in an easily configurable manner.")
"/pigx_bsseq-" version ".tar.gz"))
(sha256
(base32
"0pw797gxx6x1n56lyrvglj7q5hqq4ylfqkvlcrzq1z3j5lxcyl69"))))
"0irlnlhhw9fd4ha7hksrxn3y7j76mz5qq1wjswbs9p364laqg69y"))))
(build-system gnu-build-system)
(arguments
`(#:phases