Merge branch 'staging' into core-updates

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Marius Bakke 2019-03-04 23:05:01 +01:00
commit b4d7689f92
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51 changed files with 8273 additions and 5235 deletions

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@ -2802,14 +2802,14 @@ and is very extensible.")
(define-public python-cython
(package
(name "python-cython")
(version "0.29.5")
(version "0.29.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Cython" version))
(sha256
(base32
"1wfb68g115gmf3mv23w0hh972b0ll85gpb92ci28x6h997br0llx"))))
"1bp7cn0pp5qy63k9hbp4ka34fm01kvysh478phpkhr68npqk6pbc"))))
(build-system python-build-system)
;; we need the full python package and not just the python-wrapper
;; because we need libpython3.3m.so
@ -2841,9 +2841,6 @@ and is very extensible.")
(replace 'check
(lambda _
;; The "with_outer_raising" test fails with Python 3.7. See
;; https://github.com/cython/cython/issues/2454
(delete-file "tests/run/generators_py.py")
(invoke "python" "runtests.py" "-vv"))))))
(home-page "http://cython.org/")
(synopsis "C extensions for Python")
@ -3262,13 +3259,13 @@ library, libgit2 implements Git plumbing.")
(define-public python-pyparsing
(package
(name "python-pyparsing")
(version "2.2.1")
(version "2.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyparsing" version))
(sha256
(base32 "06dgd0iilvf8m0ssmfpcbh8l6jf0zkp8adbb84llksg17crfx4zl"))))
(base32 "0yk6xl885b91dmlhlsap7x78hk2rdr879fln9anbq6k4ca42djb6"))))
(build-system python-build-system)
(outputs '("out" "doc"))
(arguments
@ -3537,9 +3534,24 @@ toolkits.")
("python-sphinx-gallery" ,python-sphinx-gallery)
("python-numpydoc" ,python-numpydoc)
("python-ipython" ,python-ipython)
("python-ipykernel" ,python-ipykernel)
("python-mock" ,python-mock)
("graphviz" ,graphviz)
("texlive" ,texlive)
("texlive" ,(texlive-union (list texlive-latex-amsfonts
texlive-latex-amsmath
texlive-latex-enumitem
texlive-latex-expdlist
texlive-latex-geometry
texlive-latex-preview
texlive-latex-type1cm
texlive-latex-ucs
texlive-generic-pdftex
texlive-fonts-amsfonts
texlive-fonts-ec
texlive-fonts-adobe-times
texlive-fonts-txfonts)))
("texinfo" ,texinfo)
,@(package-native-inputs python-matplotlib)))
(arguments
@ -3549,15 +3561,24 @@ toolkits.")
(replace 'build
(lambda _
(chdir "doc")
;; Produce pdf in 'A4' format.
(setenv "PYTHONPATH"
(string-append (getenv "PYTHONPATH")
":" (getcwd) "/../examples/units"))
(substitute* "conf.py"
(("latex_paper_size = 'letter'") "")
;; latex_paper_size is deprecated -> set paper size using
;; latex_elements
(("latex_elements\\['pointsize'\\] = '11pt'" match)
;; insert at a point where latex_elements{} is defined:
(string-append match "\nlatex_elements['papersize'] = 'a4paper'")))
(invoke "make" "SPHINXBUILD=sphinx-build" "html" "latex" "texinfo")))
;; Don't use git.
(("^SHA = check_output.*")
(string-append "SHA = \"" ,version "\"\n"))
;; Don't fetch intersphinx files from the Internet
(("^explicit_order_folders" m)
(string-append "intersphinx_mapping = {}\n" m))
(("'sphinx.ext.intersphinx',") "")
;; Disable URL embedding which requires internet access.
(("'https://docs.scipy.org/doc/numpy'") "None")
(("'https://docs.scipy.org/doc/scipy/reference'") "None"))
(invoke "make"
"SPHINXBUILD=sphinx-build"
"SPHINXOPTS=" ; don't abort on warnings
"html" "texinfo")))
(replace 'install
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((data (string-append (assoc-ref outputs "out") "/share"))
@ -3575,12 +3596,9 @@ toolkits.")
(string-append "@image{matplotlib-figures/" file)))
(symlink (string-append html "/_images")
"./matplotlib-figures")
(system* "makeinfo" "--no-split"
"-o" "matplotlib.info" "matplotlib.texi"))
(copy-file "build/texinfo/matplotlib.info"
(string-append info "/matplotlib.info"))
(copy-file "build/latex/Matplotlib.pdf"
(string-append doc "/Matplotlib.pdf")))
(invoke "makeinfo" "--no-split"
"-o" "matplotlib.info" "matplotlib.texi"))
(install-file "build/texinfo/matplotlib.info" info))
#t)))))
(home-page (package-home-page python-matplotlib))
(synopsis "Documentation for the python-matplotlib package")
@ -14643,14 +14661,14 @@ append on old values. Partd excels at shuffling operations.")
(define-public python-dask
(package
(name "python-dask")
(version "1.0.0")
(version "1.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dask" version))
(sha256
(base32
"1xwz8h020ipwav2p5gcq9pskya1cvzd6hjyvd06dvr3w5lxlmym1"))))
"03ykmq46q2hh7mn68vcxkgylybjaj3r0kfspaiymdmqmjzpjivr5"))))
(build-system python-build-system)
;; A single test out of 5000+ fails. This test is marked as xfail when
;; pytest-xdist is used.