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gnu: python-scikit-allel: Update to 1.3.13.

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* gnu/packages/python-science.scm (python-scikit-allel): Update to 1.3.13.
[propagated-inputs]: Remove python-click.
[native-inputs]: Remove python-scipy.

Change-Id: I3c29bd3d9f87d0866da747c344740bad71cae1c3
This commit is contained in:
Ricardo Wurmus 2025-01-09 13:50:08 +01:00
parent c33caf3bcd
commit b752a03e8b
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GPG key ID: 197A5888235FACAC
1 changed files with 9 additions and 12 deletions
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gnu/packages/python-science.scm
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@ -423,13 +423,13 @@ routines such as routines for numerical integration and optimization.")
(define-public python-scikit-allel (define-public python-scikit-allel
(package (package
(name "python-scikit-allel") (name "python-scikit-allel")
(version "1.3.5") (version "1.3.13")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "scikit-allel" version)) (uri (pypi-uri "scikit_allel" version))
(sha256 (sha256
(base32 "1vg88ng6gd175gzk39iz1drxig5l91dyx398w2kbw3w8036zv8gj")))) (base32 "0d9yadzhsjjqkh6rz273f53iwczk0c7pv9dajzcrmfnk036b8f4s"))))
(build-system pyproject-build-system) (build-system pyproject-build-system)
(arguments (arguments
(list (list
@ -451,21 +451,18 @@ routines such as routines for numerical integration and optimization.")
(lambda _ (lambda _
(invoke "python" "setup.py" "build_ext" "--inplace")))))) (invoke "python" "setup.py" "build_ext" "--inplace"))))))
(propagated-inputs (propagated-inputs
(list python-dask (list python-dask python-numpy))
python-numpy
python-click))
(native-inputs (native-inputs
(list python-cython (list htslib
python-setuptools python-cython
python-wheel
;; The following are all needed for the tests
htslib
python-h5py python-h5py
python-hmmlearn python-hmmlearn
python-numexpr python-numexpr
python-numpy
python-pytest python-pytest
python-scipy python-setuptools
python-setuptools-scm python-setuptools-scm
python-wheel
python-zarr)) python-zarr))
(home-page "https://github.com/cggh/scikit-allel") (home-page "https://github.com/cggh/scikit-allel")
(synopsis "Explore and analyze genetic variation data") (synopsis "Explore and analyze genetic variation data")