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gnu: python-scipy: Reduce closure size.

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As documentation was not built at all, this change removes everything
requiring for to reduce the closue size.

* gnu/packages/python-science.scm (python-scipy): Adjust inputs
[arguments] <phases>: Remove 'install-doc.
[propagated-inputs]: Keep only python-numpy.
[native-inpusts]: Remove python-hypothesis, and python-pytest-cov; add
python-mpmath, python-numpydoc, python-pythran, python-rich-click,
python-threadpoolctl, and python-typing-extensions.

Fixes: guix/guix#2944.
Change-Id: I97e4914c3d705b47b276d3f88dc938f26b0d27a5
Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
This commit is contained in:
Hugo Buddelmeijer 2025-09-24 22:09:36 +02:00 • committed by Sharlatan Hellseher
parent 08e6a0faba
commit b76bf5dcd1
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1 changed files with 13 additions and 50 deletions
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gnu/packages/python-science.scm
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@ -3105,53 +3105,7 @@ cross-validation.")
(string-append
"import scipy; scipy.test('fast', parallel="
(number->string (parallel-job-count))
", verbose=2)"))))))
(add-after 'check 'install-doc
(lambda* (#:key outputs #:allow-other-keys)
;; FIXME: Documentation cannot be built because it requires
;; a newer version of pydata-sphinx-theme, which currently
;; cannot build without internet access:
;; <https://github.com/pydata/pydata-sphinx-theme/issues/628>.
;; Keep the phase for easy testing.
(let ((sphinx-build (false-if-exception
(search-input-file input "bin/sphinx-build"))))
(if sphinx-build
(let* ((doc (assoc-ref outputs "doc"))
(data (string-append doc "/share"))
(docdir (string-append
data "/doc/"
#$(package-name this-package) "-"
#$(package-version this-package)))
(html (string-append docdir "/html")))
(with-directory-excursion "doc"
;; Build doc.
(invoke "make" "html"
;; Building the documentation takes a very long time.
;; Parallelize it.
(string-append "SPHINXOPTS=-j"
(number->string (parallel-job-count))))
;; Install doc.
(mkdir-p html)
(copy-recursively "build/html" html)))
(format #t "sphinx-build not found, skipping~%"))))))))
(propagated-inputs
(append
(if (supported-package? python-jupytext) ; Depends on pandoc.
(list python-jupytext)
'())
(list python-matplotlib
python-mpmath
python-mypy
python-numpy
python-numpydoc
python-pydata-sphinx-theme
python-pydevtool
python-pythran
python-rich-click
python-sphinx
python-threadpoolctl
python-typing-extensions)))
(inputs (list openblas pybind11-2.10))
", verbose=2)")))))))))
(native-inputs
(list gfortran
;; XXX: Adding gfortran shadows GCC headers, causing a compilation
@ -3162,14 +3116,23 @@ cross-validation.")
python-click
python-cython-0
python-doit
python-hypothesis
python-mpmath
python-numpydoc
python-pooch
python-pycodestyle
python-pydevtool
python-pytest
python-pytest-cov
python-pytest-timeout
python-pytest-xdist))
python-pytest-xdist
python-pythran
python-rich-click
python-threadpoolctl
python-typing-extensions))
(inputs
(list openblas
pybind11-2.10))
(propagated-inputs
(list python-numpy))
(home-page "https://scipy.org/")
(synopsis "The Scipy library provides efficient numerical routines")
(description "The SciPy library is one of the core packages that make up