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gnu: Add r-amountain.
* gnu/packages/bioconductor.scm (r-amountain): New variable.
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@ -1987,6 +1987,30 @@ using the linear model features implemented in limma. Standard Bioconductor
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objects are used so that other packages could be used as well.")
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objects are used so that other packages could be used as well.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-amountain
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(package
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(name "r-amountain")
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(version "1.22.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "AMOUNTAIN" version))
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(sha256
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(base32
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"0vdfabsrisdd7qq28f5ivd0v8zz49szqn677i5lhwnlaix220c54"))))
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(properties `((upstream-name . "AMOUNTAIN")))
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(build-system r-build-system)
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(inputs (list gsl))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/AMOUNTAIN")
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(synopsis "Modules for multilayer weighted gene co-expression networks")
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(description
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"This package provides a pure data-driven gene network, @dfn{WGCN}(weighted
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gene co-expression network) could be constructed only from expression profile.
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Different layers in such networks may represent different time points, multiple
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conditions or various species. @code{AMOUNTAIN} aims to search active modules
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in multi-layer WGCN using a continuous optimization approach.")
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(license license:gpl2+)))
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(define-public r-aneufinder
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(define-public r-aneufinder
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(package
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(package
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(name "r-aneufinder")
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(name "r-aneufinder")
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