gnu: Add r-amountain.

* gnu/packages/bioconductor.scm (r-amountain): New variable.
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Mădălin Ionel Patrașcu 2022-06-17 11:09:20 +02:00 committed by Ricardo Wurmus
parent 8c85cc74f0
commit dd74da6190
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@ -1987,6 +1987,30 @@ using the linear model features implemented in limma. Standard Bioconductor
objects are used so that other packages could be used as well.") objects are used so that other packages could be used as well.")
(license license:gpl3))) (license license:gpl3)))
(define-public r-amountain
(package
(name "r-amountain")
(version "1.22.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "AMOUNTAIN" version))
(sha256
(base32
"0vdfabsrisdd7qq28f5ivd0v8zz49szqn677i5lhwnlaix220c54"))))
(properties `((upstream-name . "AMOUNTAIN")))
(build-system r-build-system)
(inputs (list gsl))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/AMOUNTAIN")
(synopsis "Modules for multilayer weighted gene co-expression networks")
(description
"This package provides a pure data-driven gene network, @dfn{WGCN}(weighted
gene co-expression network) could be constructed only from expression profile.
Different layers in such networks may represent different time points, multiple
conditions or various species. @code{AMOUNTAIN} aims to search active modules
in multi-layer WGCN using a continuous optimization approach.")
(license license:gpl2+)))
(define-public r-aneufinder (define-public r-aneufinder
(package (package
(name "r-aneufinder") (name "r-aneufinder")