gnu: Further simplify package inputs.

This is the result of running:

  ./pre-inst-env guix style --input-simplification=safe

and manually undoing changes on a dozen of packages to reduce
rebuilds (derivations for emacs, icecat, and libreoffice are unchanged.)
This commit is contained in:
Ludovic Courtès 2021-12-13 22:15:07 +01:00
parent fc9ca46aa6
commit e3196755e6
No known key found for this signature in database
GPG key ID: 090B11993D9AEBB5
94 changed files with 1544 additions and 2077 deletions

View file

@ -1510,14 +1510,14 @@ used visualizations.")
"07vr27rv3z86ajd62c0ilvfgz9z35qsiwwi5pv4sygbhnnjwh3rc"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
("r-kernsmooth" ,r-kernsmooth)
("r-matrixstats" ,r-matrixstats)
("r-patchwork" ,r-patchwork)
("r-pbapply" ,r-pbapply)
("r-statmod" ,r-statmod)
("r-survey" ,r-survey)
("r-viridislite" ,r-kernsmooth)))
(list r-ggplot2
r-kernsmooth
r-matrixstats
r-patchwork
r-pbapply
r-statmod
r-survey
r-kernsmooth))
(home-page "https://github.com/borishejblum/dearseq")
(synopsis "DEA for RNA-seq data through a robust variance component test")
(description
@ -3578,30 +3578,30 @@ throughput genetic sequencing data sets using regression methods.")
(native-inputs
(list r-knitr))
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
("r-bsgenome" ,r-bsgenome)
;; These two packages are suggested packages
("r-bsgenome-hsapiens-1000g" ,r-bsgenome-hsapiens-1000genomes-hs37d5)
("r-bsgenome-hsapiens-ucsc-hg19" ,r-bsgenome-hsapiens-ucsc-hg19)
("r-cowplot" ,r-cowplot)
("r-dplyr" ,r-dplyr)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-ggalluvial" ,r-ggalluvial)
("r-ggdendro" ,r-ggdendro)
("r-ggplot2" ,r-ggplot2)
("r-iranges" ,r-iranges)
("r-magrittr" ,r-magrittr)
("r-nmf" ,r-nmf)
("r-pracma" ,r-pracma)
("r-purrr" ,r-purrr)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-s4vectors" ,r-s4vectors)
("r-stringr" ,r-stringr)
("r-tibble" ,r-tibble)
("r-tidyr" ,r-tidyr)
("r-variantannotation" ,r-variantannotation)))
(list r-biocgenerics
r-biostrings
r-bsgenome
;; These two packages are suggested packages
r-bsgenome-hsapiens-1000genomes-hs37d5
r-bsgenome-hsapiens-ucsc-hg19
r-cowplot
r-dplyr
r-genomeinfodb
r-genomicranges
r-ggalluvial
r-ggdendro
r-ggplot2
r-iranges
r-magrittr
r-nmf
r-pracma
r-purrr
r-rcolorbrewer
r-s4vectors
r-stringr
r-tibble
r-tidyr
r-variantannotation))
(home-page "https://bioconductor.org/packages/MutationalPatterns/")
(synopsis "Extract and visualize mutational patterns in genomic data")
(description "This package provides an extensive toolset for the