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gnu: cnvkit: Update to 0.9.12.

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* gnu/packages/bioinformatics.scm (cnvkit): Update to 0.9.12.
[build-system]: Switch to pyproject.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: Ia48f681ac2c45872c92214d685819579a40eae7a
Signed-off-by: Steve George <steve@futurile.net>
This commit is contained in:
Nicolas Graves 2025-04-06 14:37:13 +02:00 • committed by Andreas Enge
parent 0d41651da2
commit ea99274af3
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1 changed files with 3 additions and 3 deletions
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@ -21217,7 +21217,7 @@ polymorphisms) and indels with respect to a reference genome and more.")
(define-public cnvkit
(package
(name "cnvkit")
(version "0.9.10")
(version "0.9.12")
(source
(origin
(method git-fetch)
@ -21226,7 +21226,7 @@ polymorphisms) and indels with respect to a reference genome and more.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0r303pqjg70zpxa564bavbfj99c6di0dafgqqwx2vh4vfsiif94q"))))
(base32 "090yh17symcahddx399kcx0mcw4gdrcc2jil3p8lb92r8c8kglb5"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-biopython
@ -21243,7 +21243,7 @@ polymorphisms) and indels with respect to a reference genome and more.")
;; R packages
r-dnacopy))
(inputs (list r-minimal)) ;for tests
(native-inputs (list python-setuptools python-wheel))
(native-inputs (list python-pytest python-setuptools python-wheel))
(home-page "https://cnvkit.readthedocs.org/")
(synopsis "Copy number variant detection from targeted DNA sequencing")
(description