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gnu: Add snakemake-4.

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* gnu/packages/python.scm (snakemake-4): New variable.
* gnu/packages/bioinformatics.scm (pigx-bsseq, pigx-rnaseq, pigx-scrnaseq,
pigx-chipseq)[inputs]: Use it.
This commit is contained in:
Ricardo Wurmus 2018-07-27 15:13:56 +02:00
parent 269f100330
commit ed2dfe3955
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GPG key ID: 197A5888235FACAC
2 changed files with 22 additions and 4 deletions
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gnu/packages/bioinformatics.scm
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@ -12837,7 +12837,7 @@ once. This package provides tools to perform Drop-seq analyses.")
#t)))))
(inputs
`(("gzip" ,gzip)
("snakemake" ,snakemake)
("snakemake" ,snakemake-4)
("fastqc" ,fastqc)
("multiqc" ,multiqc)
("star" ,star)
@ -12931,7 +12931,7 @@ expression report comparing samples in an easily configurable manner.")
("fastqc" ,fastqc)
("bowtie" ,bowtie)
("idr" ,idr)
("snakemake" ,snakemake)
("snakemake" ,snakemake-4)
("samtools" ,samtools)
("bedtools" ,bedtools)
("kentutils" ,kentutils)))
@ -12992,7 +12992,7 @@ in an easily configurable manner.")
("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc-with-pandoc-1)
("python-wrapper" ,python-wrapper)
("python-pyyaml" ,python-pyyaml)
("snakemake" ,snakemake)
("snakemake" ,snakemake-4)
("bismark" ,bismark)
("fastqc" ,fastqc)
("bowtie" ,bowtie)
@ -13041,7 +13041,7 @@ methylation and segmentation.")
("python-loompy" ,python-loompy)
("ghc-pandoc" ,ghc-pandoc-1)
("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc-with-pandoc-1)
("snakemake" ,snakemake)
("snakemake" ,snakemake-4)
("star" ,star)
("r-minimal" ,r-minimal)
("r-argparser" ,r-argparser)