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gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri.

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* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
This commit is contained in:
Ricardo Wurmus 2019-12-04 09:33:09 +01:00
parent 717d7cda9d
commit f2580a1385
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1 changed files with 2 additions and 9 deletions
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gnu/packages/bioconductor.scm
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@ -497,21 +497,14 @@ genomes and gene ID formats, largely based on the UCSC table browser.")
(version "3.2.2") (version "3.2.2")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
;; We cannot use bioconductor-uri here because this tarball is (uri (bioconductor-uri "TxDb.Hsapiens.UCSC.hg19.knownGene"
;; located under "data/annotation/" instead of "bioc/". version 'annotation))
(uri (string-append "https://bioconductor.org/packages/"
"release/data/annotation/src/contrib"
"/TxDb.Hsapiens.UCSC.hg19.knownGene_"
version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86")))) "1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"))))
(properties (properties
`((upstream-name . "TxDb.Hsapiens.UCSC.hg19.knownGene"))) `((upstream-name . "TxDb.Hsapiens.UCSC.hg19.knownGene")))
(build-system r-build-system) (build-system r-build-system)
;; As this package provides little more than a very large data file it
;; doesn't make sense to build substitutes.
(arguments `(#:substitutable? #f))
(propagated-inputs (propagated-inputs
`(("r-genomicfeatures" ,r-genomicfeatures))) `(("r-genomicfeatures" ,r-genomicfeatures)))
(home-page (home-page