gnu: python-changeo: Adjust style.

* gnu/packages/bioinformatics.scm (python-changeo): Re-order fields,
activate tests.
[source]: Switch to PyPI archive which provides tests.
[native-inputs]: Remove python-airr and python-wheel; add python-pytest.
[home-page]: Use the one which is provided by PyPI.

Change-Id: I5b21bc984f197d7fa634efb0672b5cbb6fc85447
This commit is contained in:
Sharlatan Hellseher 2025-09-16 21:00:53 +01:00
parent aebff21636
commit f400146871
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GPG key ID: 76D727BFF62CD2B5

View file

@ -4742,18 +4742,19 @@ high-throughput sequencing of B cell and T cell repertoires.")
(package (package
(name "python-changeo") (name "python-changeo")
(version "1.3.4") (version "1.3.4")
(home-page "https://github.com/immcantation/changeo")
(source (source
(origin (origin
(method git-fetch) (method url-fetch)
(uri (git-reference (uri (pypi-uri "changeo" version))
(url home-page)
(commit version)))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32 "0jm4chddpl929a8daicp9mv14nwzf2hajpjfhzckg6x8cpgc1087"))))
"1230bb7672n6nqkrw2fvrprknchhlvvxb76l1r4g6ybrq0g7l0rb"))))
(build-system pyproject-build-system) (build-system pyproject-build-system)
(arguments
(list
#:build-backend "setuptools.build_meta"))
(native-inputs
(list python-pytest
python-setuptools))
(propagated-inputs (propagated-inputs
(list python-airr (list python-airr
python-biopython python-biopython
@ -4764,13 +4765,7 @@ high-throughput sequencing of B cell and T cell repertoires.")
python-presto python-presto
python-pyyaml python-pyyaml
python-scipy)) python-scipy))
(native-inputs (home-page "http://changeo.readthedocs.io")
(list python-airr
python-setuptools
python-wheel))
(arguments
(list
#:build-backend "setuptools.build_meta"))
(synopsis "Repertoire clonal assignment toolkit") (synopsis "Repertoire clonal assignment toolkit")
(description "Change-O is a collection of tools for processing the output (description "Change-O is a collection of tools for processing the output
of V(D)J alignment tools, assigning clonal clusters to immunoglobulin (Ig) of V(D)J alignment tools, assigning clonal clusters to immunoglobulin (Ig)