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gnu: r-sparsearray: Fix build.

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* gnu/packages/bioconductor.scm (r-sparsearray)[arguments]<#:phases>:
Add 'relax-floating-point-tests.

Change-Id: Ia39226c46180422e9a979b68200d8175d1c2957b
This commit is contained in:
Andreas Enge 2025-07-17 22:03:36 +02:00
parent fe5d8f5359
commit f5e7ae1810
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gnu/packages/bioconductor.scm
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@ -25936,6 +25936,26 @@ variable and significantly correlated genes.")
r-s4vectors
r-xvector))
(native-inputs (list r-knitr r-testthat))
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'relax-floating-point-tests
;; Test files that are modified below contain the following
;; comment:
;; "Looks like using expect_identical() is too strict for some
;; operations on some systems"
;; then modify the tests to expect_equal for specific functions
;; on speficic systems. This looks as if we are in the presence
;; of floating point discrepancies, which are poorly suited for
;; a strict test suite rejecting builds. Since the tests also
;; fail in Guix on x86_64 with gcc@14, let us use expect_equal
;; everywhere.
(lambda _
(substitute*
'("tests/testthat/test-NaArray-Math-methods.R"
"tests/testthat/test-SparseArray-Math-methods.R")
(("expect_identical\\(as") "expect_equal(as")))))))
(home-page "https://bioconductor.org/packages/SparseArray")
(synopsis
"Efficient in-memory representation of multidimensional sparse arrays")