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gnu: Add r-maftools.
* gnu/packages/bioconductor.scm (r-maftools): New variable.
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@ -12902,6 +12902,30 @@ scan putative TFBS from sequence/alignment, query JASPAR database and
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provides a wrapper of de novo motif discovery software.")
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provides a wrapper of de novo motif discovery software.")
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(license license:gpl2)))
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(license license:gpl2)))
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(define-public r-maftools
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(package
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(name "r-maftools")
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(version "2.10.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "maftools" version))
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(sha256
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(base32 "1s8w3xwwigz803l81bs9cb2dbvvw5r9z8jjcav1rmh9wm8909nfd"))))
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(properties `((upstream-name . "maftools")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-data-table r-rcolorbrewer r-rhtslib r-survival r-zlibbioc))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/PoisonAlien/maftools")
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(synopsis "Summarize, analyze and visualize MAF files")
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(description
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"Analyze and visualize Mutation Annotation Format (MAF) files from large
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scale sequencing studies. This package provides various functions to perform
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most commonly used analyses in cancer genomics and to create feature rich
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customizable visualzations with minimal effort.")
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(license license:expat)))
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(define-public r-motifmatchr
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(define-public r-motifmatchr
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(package
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(package
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(name "r-motifmatchr")
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(name "r-motifmatchr")
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