* gnu/packages/maths.scm (python-libensemble): Update to 1.4.2.
[propagated-inputs]: Add python-mpmath.
[arguments]: Delete a file that contains a failing test.
Change-Id: I76deae624b7f2bede63ad1b2bcf445c5aae53953
* gnu/packages/maths.scm (gsl)[arguments]: Pass #:make-flags '() on
i686-linux. Remove modification of ‘linalg/test.c’ in
‘disable-failing-tests’ phase for i686-linux.
Change-Id: I615d4e0d71253ca294bc5c5c7a278e3046c186cc
* gnu/packages/maths.scm (gsl)[outputs]: New field.
[arguments]: Remove configure-flag disabling static library. Add
make-flag to produce PIC output. Add a phase to move the static
libraries into the static output.
Change-Id: I4c5dddb8d384f4e2f82122b239da44350bacf57a
Until now users would have to cargo cult or inspect the private
%default-modules variable of (guix build-systems gnu) to discover which
modules to include when extending the used modules via the #:modules argument.
The renaming was automated via the command:
$ git grep -l %gnu-build-system-modules
| xargs sed 's/%gnu-build-system-modules/%default-gnu-imported-modules/' -i
* guix/build-system/gnu.scm (%gnu-build-system-modules): Rename to...
(%default-gnu-imported-modules): ... this.
(%default-modules): Rename to...
(%default-gnu-modules): ... this. Export.
(dist-package, gnu-build, gnu-cross-build): Adjust accordingly.
Change-Id: Idef307fff13cb76f3182d782b26e1cd3a5c757ee
* gnu/packages/maths.scm (nauty): Update to 2.8.9.
[arguments]<#:phases>: Add a phase for fixing a test.
Change-Id: I854754ab372ef6ae1d5e13e14c0fc8a667177b4d
Fixes <https://issues.guix.gnu.org/68313>.
HDF5 1.14.3 contains the fix for <https://github.com/HDFGroup/hdf5/pull/3421>.
* gnu/packages/maths.scm (hdf5-parallel-openmpi): Inherit from HDF5-1.14.
[arguments]: Take arguments from HDF5-1.14. Use gexps.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: I99222a1085dcd75c3c9ac83a0e88495e86a8cf59
* gnu/packages/maths.scm (petsc)[arguments]: In ‘configure’ phase, add
‘sorted’ call in ‘gmakegen.py’.
In ‘clean-local-references’, remove substitution of “Libraries compiled
on”, which is unnecessary since PETSc 3.9
(<a970bd7489>).
Add substitution for “Machine characteristics” bit.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: Ibb846c1ae368af94b46d5ce789b1263e0bc78a13
* gnu/packages/maths.scm (openblas-ilp64)[supported-systems]: Mark all
64bit platforms as supported.
Change-Id: I3956b0140798842bae23fc5f855f0953ec81b53d
Frama-C needs the OCAMLPATH variable to be defined to load libraries, so
define it using the OCAMLPATH variable generated during build time.
Related issues:
- <https://issues.guix.gnu.org/54094> (fixes it).
- <https://issues.guix.gnu.org/69996> (only Frama-C fixed from this one).
* gnu/packages/maths.scm (frama-c) <arguments>: Add wrap-programs phase.
Change-Id: Icc8a0be5fed6678b71649da2e39a83caaaee9df2
Signed-off-by: jgart <jgart@dismail.de>
* gnu/packages/maths.scm (why3) <propagated-inputs>: Add
ocaml-ppx-deriving, ocaml-ppx-sexp-conv, ocaml-re and ocaml-sexplib to
enable extra features.
Change-Id: Ia3b66ac08cc25097967c6e18f2193601fb748cac
Signed-off-by: Andreas Enge <andreas@enge.fr>
* gnu/packages/maths.scm (why3): Use new style and move arguments
above input fields.
Change-Id: Ia9cb04cafe426d7f20c5efb10ca540572dbd3be9
Signed-off-by: Andreas Enge <andreas@enge.fr>
This is a commit with which the dependent package minizinc builds
successfully.
* gnu/packages/maths.scm (gecode): Downgrade to 6.2.0-2.2d20e88.
Change-Id: I0bdb0131374639b1664e6ec40374d51b6922094c
* gnu/packages/maths.scm (scilab)[source]<origin>: Improve
package management robustness in scilab-cli by allowing
tbx_build_help to log the scilab mode incompatibility error and not
process the rest of the function instead of failing with it.
* gnu/packages/patches/scilab-tbx_build_help.patch :
Add patch.
* gnu/local.mk(dist_patch_DATA): Add
gnu/packages/patches/scilab-tbx_build_help.patch.
Change-Id: I8ee94afb4aba906cbc8c7ca67f4c89aa0cf55ae6
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu/packages/maths.scm (scilab):
[arguments]<#:phases>: In pre-build phase, remove unecessary
code, due to the former introduction of the rewrap-scilab-cli
phase. More robust version setting in the set-version phase. It
anticipates for the next release which will not use "main" anymore.
[source]<origin>(snippet) Sort dynamic_link deleted files.
[inputs]: Add bash-minimal.
Change-Id: I49b17886405e1ed8161e71b51655fa393ff7f10b
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu/packages/maths.scm (superlu-dist)[arguments]: Adjust library names
to match current ‘scotch’.
Change-Id: If64094c058cc3be58435fe1c47cc99fb0a9e1fff
Fixes a bug when building ‘superlu-dist’ where ‘int32_t’ would be
undefined.
* gnu/packages/maths.scm (scotch)[source]: Add ‘snippet’.
Change-Id: Id5beb2034d762727458821b93568e5b733184c00
