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Author SHA1 Message Date
Sharlatan Hellseher
912920236a
gnu: python-pyzmq: Update to 27.0.1. 
The project does not ship bundled source of zeromq and cythonized files,
instead it use <buildutils/bundle.py> to ship as a build option relying
on system libraries.  The build is controlled via CMakeLists.txt.

* gnu/packages/python-xyz.scm (python-pyzmq): Update to 27.0.1. Use G-expressions.
  [source] <snippet>: Remove all as no longer required.
  [build-system]: Use pyproject.
  [arguments] <configure-flags>: Remove as no longer required.
  <phases>: Remove 'build-extensions and replace by 'delete-source which
  is chepper than to rebuild it once again; use default 'check.
  [inputs]: Add libsodium.
  [native-inputs]: Remove pkg-config, and python-tornado-6; add
  cmake-minimal, python-packaging, python-scikit-build-core, and
  python-tornado.

Change-Id: I6ec22d172fb2cc542923f4d2adfe326716d482cf
 2025-09-25 09:36:00 +01:00
Sharlatan Hellseher
b1839a4af4
gnu: python-ipython: Update to 8.37.0. 
* gnu/packages/python-xyz.scm (python-ipython): Update to 8.37.0.
  [arguments] <test-flags>: Skip 3 more tests.
  [native-inputs]: Remove python-pytest-asyncio; add
  python-pytest-asyncio-0.21.

Change-Id: Ia362ee0f6397bf3cfcff9f35f2f63d8f30e7198d
 2025-09-25 09:36:00 +01:00
Sharlatan Hellseher
aa04ed1d2d
gnu: python-matplotlib-inline: Update to 0.1.7. 
* gnu/packages/python-xyz.scm (python-matplotlib-inline): Update to 0.1.7.
  [source] <pypi-uri>: Fix archive name adjusting "-" to "_".
  [build-system]: Use pyproject.
  [arguments] <phases>: Delete 'sanity-check.
  [native-inputs]: Add python-setuptools.

Change-Id: I34b99d1cbf8faf33ee3273e4a2d367f1e1b551c8
 2025-09-25 09:36:00 +01:00
Sharlatan Hellseher
a27d4166ce
gnu: python-stack-data: Skip some tests. 
* gnu/packages/python-xyz.scm (python-stack-data): [arguments]
<test-flags>: Skip 3 problematic tests.

Change-Id: Id7bb16f0ac20d6105628102c0ba803a09b43f4ef
 2025-09-25 09:36:00 +01:00
Sharlatan Hellseher
ef2cd2d4ab
gnu: python-prompt-toolkit: Update to 3.0.51. 
* gnu/packages/python-xyz.scm (python-prompt-toolkit): Update to 3.0.51.
  [build-system]: Use pyproject.
  [arguments] <phases>: Use default 'check; add 'pre-check.
  [native-inputs]: Add python-setuptools.

Change-Id: If7f626ff2ef9a564968a969810d05e6767d6d17b
 2025-09-25 09:36:00 +01:00
Sharlatan Hellseher
2c358fcdf1
gnu: python-jupyter-core: Improve package. 
* gnu/packages/python-xyz.scm (python-jupyter-core): Use
  G-expressions. Fix indentation.
  [arguments] <test-flags>: Skip test requiring python-pip; refactor
  with STRING-JOIN.
  [native-inputs]: Remove python-pip, python-pre-commit, and
  python-pytest-cov.

Change-Id: I677c0c7dd6e38fde126c5b69bd1b901999f8cfce
 2025-09-25 09:36:00 +01:00
Sharlatan Hellseher
c8a847b2bf
gnu: python-colorlog: Update to 6.9.0. 
* gnu/packages/python-xyz.scm (python-colorlog): Update to 6.9.0.
[build-system] Use pyproject.
[arguments] <phases>: Use default 'check.
[native-inputs]: Add python-setuptools.

Change-Id: I7b054c74b0c3faf7d0221fef670edb649fce4631
 2025-09-25 09:35:59 +01:00
Sharlatan Hellseher
8c52cb7f7a
gnu: python-docopt: Switch to pyproject-build-system. 
* gnu/packages/python-xyz.scm (python-docopt)
  [build-system]: Use pyproject.
  [native-inputs]: Add python-setuptools.

Change-Id: I9ab05b07d55ebaad946361535a7853a48b87ec45
 2025-09-25 09:35:59 +01:00
Sharlatan Hellseher
f55ff0510a
gnu: python-pymongo: Update to 4.14.0. 
* gnu/packages/python-xyz.scm (python-pymongo): Update to 4.14.0.
[build-system]: Use pyproject.
[arguments] <test-flags>: Skip prolematic test.
[propagated-inputs]: Add python-dnspython.
[native-inputs]: Add python-hatch-requirements-txt, python-hatchling,
python-pytest, python-pytest-asyncio, and python-setuptools.

Change-Id: If292db8d2e00339048f553a199315d5497173b53
 2025-09-25 09:35:59 +01:00
Sharlatan Hellseher
3c794f2655
gnu: python-executing: Update to 2.2.0. 
* gnu/packages/python-xyz.scm (python-executing): Update to 2.2.0.
  [arguments] <phases>: Add 'fix-tests.
  [native-inputs]: Remove python-toml; add python-rich.

Change-Id: Ic03771d27d7602799619bc962426697a2e7aac19
 2025-09-25 09:35:59 +01:00
Sharlatan Hellseher
c8cc9c00ab
gnu: python-littleutils: Update to 0.2.4. 
* gnu/packages/python-xyz.scm (python-littleutils): Update to 0.2.4.
  [build-system]: Use pypojrect.
  [native-inputs]: Add python-setuptools, python-setuptools-scm, and
  python-wheel.

Change-Id: I577e1a929b674908c70b807fd2fbc844810172ce
 2025-09-25 09:35:59 +01:00
Sharlatan Hellseher
6882a66691
gnu: python-fastjsonschema: Update to 2.21.1. 
* gnu/packages/python-xyz.scm (python-fastjsonschema): Update to 2.21.1.
[native-inputs]: Remove python-colorama, python-pytest-cache, and python-wheel.

Change-Id: I059d6792b2d9573a05140f2657f86427914347bb
 2025-09-25 09:35:59 +01:00
Sharlatan Hellseher
4a622189ec
gnu: python-tomlkit: Update to 0.13.3. 
* gnu/packages/python-xyz.scm (python-tomlkit): Update to 0.13.3.
  [build-system]; Use pyproject.
  [native-inputs]: Add python-poetry-core.

Change-Id: I5c7acc84e0390d621483cbcff81d83ac339960de
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
c35dbc1f80
gnu: python-json-spec: Update to 0.12.0. 
* gnu/packages/python-xyz.scm (python-json-spec): Update to 0.12.0.
  [source]: Switch to git-fetch providing tests.
  [build-system]: Use pyproject.
  [propagated-inputs]: Remove python-importlib-metadata.
  [native-inputs]: Add python-poetry-core.

Change-Id: Ie6fdb0a96b164b89f07a2fa5ff7f153439449d54
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
8c8d025881
gnu: python-asttokens: Update to 3.0.0. 
* gnu/packages/python-xyz.scm (python-asttokens): Update to 3.0.0.
[propagated-inputs]: Remove python-six.

Change-Id: I289e2675c5d72b7f016d2bc791f75c0e4da29112
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
d913f6bcf8
gnu: python-msgpack: Update to 1.1.1. 
* gnu/packages/python-xyz.scm (python-msgpack): Update to 1.1.1.
  [build-system]: Use pyproject.
  [arguments]: Drop them.
  [native-inputs]: Add python-setuptools.

Change-Id: I4ba8061c95916daa03db8f269ee8019826991de5
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
c6d14b9a7d
gnu: python-astroid: Update to 3.3.11. 
* gnu/packages/python-xyz.scm (python-astroid): Update to 3.3.11.
[native-inputs]: Add python-mypy-minimal.

Change-Id: Ic0bbe5bb59260fe1445aceb09f5cea6bfb2c82fd
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
222ba4ac2d
gnu: python-lazy-object-proxy: Update to 1.11.0. 
* gnu/packages/python-xyz.scm (python-lazy-object-proxy): Update to 1.11.0.
[native-inputs]: Remove python-pip; add python-pytest and python-pytest-benchmark.

Change-Id: I8bee8c95755ad89733f03291a8403689b2a52125
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
1fbaa8a408
gnu: python-openpyxl: Reduce closure size. 
* gnu/packages/python-xyz.scm (python-openpyxl):
  [propagated-inputs]: Remove python-jdcal - not listed in install
  dependencies.
  [native-inputs]: Remove python-wheel.

Change-Id: I862613faafe2c4fae4c85b26b38a882ea84f12b5
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
c34260c16e
gnu: python-xlrd: Update to 2.0.2. 
* gnu/packages/python-xyz.scm (python-xlrd): Update to 2.0.2.
  [build-system]: Use pyproject.
  [native-inputs]: Add python-setuptools.

Change-Id: I7622d787dd9f6c516952a5680e1028707406817a
 2025-09-25 09:35:58 +01:00
Sharlatan Hellseher
d2972d8b0d
gnu: python-et-xmlfile: Update to 2.0.0. 
* gnu/packages/python-xyz.scm (python-et-xmlfile): Update to 2.0.0.
  [build-system]: Use pyproject.
  [arguments] <phases>: Use default 'check.
  [native-inputs]: Add python-setuptools.

Change-Id: I8275f0b9980b1aa70785dcb4d60ff86b6a9053b9
 2025-09-25 09:35:57 +01:00
Sharlatan Hellseher
f20e543db7
gnu: python-argcomplete: Fix tests. 
* gnu/packages/python-xyz.scm (python-argcomplete)
[arguments] <test-backend>: Use custom.
<test-flags>: Move option here from custom 'check phase..
<phases>: Use default 'check; add disable-pip-tests..
[native-inputs]: Remove python-coverage, python-mypy, and python-wheel.

Change-Id: Ica763b449ebef64000181fe192cad691be39db73
 2025-09-25 09:35:56 +01:00
Sharlatan Hellseher
e15771f1fc
gnu: python-matplotlib: Reduce closure size. 
* gnu/packages/python-xyz.scm (python-matplotlib):
  [native-inputs]: Remove python-setuptools-scm-git-archive.

Change-Id: I0db74e40f935b76e49d9cb8f0214513fb41fa8b8
 2025-09-25 09:35:56 +01:00
Jake Forster
1056e4697c
gnu: python-matplotlib: Set the default backend to TkAgg. 
The interactive backend TkAgg works out of the box (i.e. without requiring
changes to user Python code) since commit
d5d790b5e0f7690d6bef9224932909a68f4fccbe.

* gnu/packages/python-xyz.scm (python-matplotlib) [arguments]
<#:phases>{configure-environment}: Change rc_options backend from Agg to
TkAgg.

Change-Id: I5614e37e674838ba8ad3ebc76c0ed42973d5ec29
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-09-25 09:35:56 +01:00
Jake Forster
ebeb9707d5
gnu: python-matplotlib: Patch dlopen so MPLBACKEND is not overridden. 
Fixes <https://issues.guix.gnu.org/70687>.

In Python, importing 'matplotlib.pyplot' sets the backend used by Matplotlib
to Agg unless it was set to WebAgg or nbAgg.  This is because it incorrectly
determines that no event loop can be started due to a failed dlopen call for
'libX11.so.6'.  This is fixed by patching the dlopen path.

* gnu/packages/python-xyz.scm (python-matplotlib) [arguments]
<#:phases>: Add 'patch-dlopen.

Change-Id: I3e45c9a2921374e3b16cfcbd8e3e1e91780da306
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-09-25 09:35:56 +01:00
Sharlatan Hellseher
d1775507d1
gnu: python-cycler: Update to 0.12.1. 
* gnu/packages/python-xyz.scm (python-cycler): Update to 0.12.1.
  [build-system]: Use pyporject.
  [propagated-inputs]: Remove python-six.
  [native-inputs]: Add python-pytest and python-setuptools.

Change-Id: I220e869568761cdcbf8ba0219207c42de0271ab0
 2025-09-25 09:35:56 +01:00
Sharlatan Hellseher
eb308effb0
gnu: python-cppy: Update to 1.3.1. 
* gnu/packages/python-xyz.scm (python-cppy): Update to 1.3.1.
[native-inputs]: Add python-pytest and python-setuptools-scm.

Change-Id: I45f88d7efd3cb20bfb7b8f14b90d15ddcc081a6d
 2025-09-25 09:35:56 +01:00
Sharlatan Hellseher
5b69d15eee
gnu: python-wurlitzer: Update to 3.1.1. 
* gnu/packages/python-xyz.scm (python-wurlitzer): Update to 3.1.1.
[native-inputs]: Remove python-mock; add python-setuptools.

Change-Id: Ie56041f27f6a8f0b707decde2423ffcd00f640de
 2025-09-25 09:35:56 +01:00
Nicolas Graves
995071641b
gnu: python-rich: Ignore more failing tests. 
* gnu/packages/python-xyz.scm (python-rich)[arguments][test-flags}:
Ignore more failing tests.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-09-25 09:35:55 +01:00
Sharlatan Hellseher
eff7e1db41
gnu: python-commonmark: Switch to pyproject-build-system. 
* gnu/packages/python-xyz.scm (python-commonmark):
  [build-system]: Use pyproject.
  [arguments] <phases>: Use default 'check.
  [native-inputs]: Add python-setuptools.

Change-Id: I820373fc3e23ccb3222a6409e0ea7b977376e776
 2025-09-25 09:35:55 +01:00
Sharlatan Hellseher
98b4c5d529
gnu: python-flit: Reduce closure size. 
* gnu/packages/python-xyz.scm (python-flit): Documentation is not built,
  remove dependencies on Sphinx.
  [propagated-inputs]: Remove python-pypa-build.
  [native-inputs]: Remove python-pygments-github-lexers,
  python-pytest-cov, python-sphinx, and python-sphinxcontrib-github-alt.

Change-Id: Iba62d2c1c52b64db65e29cbdd0381f470ee3116d
 2025-09-25 09:35:55 +01:00
Nguyễn Gia Phong
6416a324d7
gnu: python-flit: Update to 3.12.0. 
* gnu/packages/python-xyz.scm (python-flit): Update to 3.12.0.

Change-Id: I24833e303dcda9613b2ab76761b29347a603d0dc
 2025-09-25 09:35:55 +01:00
Sharlatan Hellseher
4af6c9fa78
gnu: python-beautifulsoup4: Update to 4.13.4. 
* gnu/packages/python-xyz.scm (python-beautifulsoup4): Update to 4.13.4.
  [propagated-inputs]: Add python-typing-extensions, python-cchardet,
  python-chardet, and python-charset-normalizer.

Change-Id: I90db98f1547455732eb21d0efba865e351537336
 2025-09-25 09:35:55 +01:00
Sharlatan Hellseher
7c4cb10ac7
gnu: python-soupsieve: Update to 2.7. 
* gnu/packages/python-xyz.scm (python-soupsieve): Update to 2.7.
  [build-system]: Use pyproject.
  [arguments] <tests?>: Enable.
  <phases>: Keep 'sanity-check.
  [native-inputs]: Add python-beautifulsoup4-bootstrap,
  python-hatchling, and python-pytest.

Change-Id: Iaf299e23c70832e1d90b7dcaec4a2ab0f058c5af
 2025-09-25 09:35:54 +01:00
Sharlatan Hellseher
1afb94ae48
gnu: Add python-beautifulsoup4-bootstrap. 
* gnu/packages/python-xyz.scm (python-beautifulsoup4-bootstrap): New variable.

Change-Id: I776b58a6290c9d7b20e27281dccfc9ad6d333a6e
 2025-09-25 09:35:54 +01:00
Sharlatan Hellseher
f229f007ef
gnu: python-imagesize: Set test-backend. 
* gnu/packages/python-xyz.scm (python-imagesize) [arguments]
  <test-backend>: Set to 'unittest.

Change-Id: I3bdc531fc38f6b9b2ab5f461f89dcfba4d71f696
 2025-09-25 09:35:53 +01:00
Sharlatan Hellseher
254fdd04b9
gnu: python-olefile: Update to 0.47. 
* gnu/packages/python-xyz.scm (python-olefile): Update to 0.47.
  [source]: Switch to git-fetch.
  [build-system]: Use pypproject.
  [native-inputs]: Add python-pytest and python-setuptools.

Change-Id: Ia74e58310f6810a888b7d20b44aed2bfa0a6e2c7
 2025-09-25 09:35:53 +01:00
Sharlatan Hellseher
50caf2b5e3
gnu: python-markdown2: Update to 2.5.3. 
* gnu/packages/python-xyz.scm (python-markdown2): Update to 2.5.3.
  [arguments] <test-backend>: Use 'custom.
  <test-flags>: Provides options as seen in project's Makefile.
  [native-inputs]: Remove python-pygments, python-pytest, and
  python-wheel.

Change-Id: I502c32abd249a1b3b8532e01621dc36ce7b74734
 2025-09-25 09:35:53 +01:00
Sharlatan Hellseher
f7f6e2955b
gnu: python-anytree: Update to 2.13.0. 
* gnu/packages/python-xyz.scm (python-anytree): Update to 2.13.0.
  [propagated-inputs]: Remove python-six.
  [native-inputs]: Remove python-poetry-core; add python-pdm-backend,
  python-pytest-cov, python-pyyaml and python-test2ref.

Change-Id: I013875d693c0bc910544d0edbae0764103165b50
 2025-09-25 09:35:53 +01:00
Sharlatan Hellseher
15fb90edc9
gnu: python-binaryornot: Switch to pyproejct-build-system. 
* gnu/packages/python-xyz.scm (python-binaryornot):
  [build-system]: Use pyproejct.
  [arguments] <test-backend>: Use custom unittest.
  <phases>: Remove trailing #t from lambdas.
  [propagated-inputs]: Remove python-hypothesis.
  [native-inputs]: Add python-hypothesis and python-setuptools.

Change-Id: Ic6e24e1bbfae846bc9b0ab9195556fcf86af9c25
 2025-09-25 09:35:52 +01:00
Sharlatan Hellseher
ccd86b711f
gnu: python-scour: Switch to pyproject-build-system. 
This project is unmaintained since 2020, the only user is Inkscape, and
the development has been moved to GitLab.

See: <https://gitlab.com/inkscape/inkscape-docs/documentation/-/issues/43>,
     <https://github.com/scour-project/scour/issues/321>.

* gnu/packages/python-xyz.scm (python-scour): Add a maintenance note on
  the upstream status.
  [source] <url>: Switch to Inkscape's GitLab page.
  [build-system]: Use pyproject.
  [arguments] <test-backend>: Use 'custom.
  [native-inputs]: Add python-setuptools.
  [home-page]: Switch URL to Inkscape's GitLab page.
  [description]: Start from a new line, fix fill column.

Change-Id: I56d94188b8a69a6739e5d2a5550bb0a3ee8b9247
 2025-09-25 09:35:52 +01:00
Sharlatan Hellseher
7809bebb39
gnu: python-appdirs: Switch to pyproject-build-system. 
* gnu/packages/python-xyz.scm (python-appdirs):
  [build-system]: Use pyproject.
  [arguments] <test-backend>: Use 'unittest.
  [native-inputs]: Add python-setuptools.

Change-Id: I234b65a99870f0e7e373681719b1ba61e2da85fb
 2025-09-25 09:35:52 +01:00
Sharlatan Hellseher
7674e46b19
gnu: python-flasgger: Reduce closure size. 
* gnu/packages/python-xyz.scm (python-flasgger): Update to 0.9.7.1.
  [arguments] <test-flags>: Skip example tests to reduce closure size
  from native inputs.
  <phases>: Remove 'prepare-check.
  [native-inputs]: Remove python-apispec, python-apispec-webframeworks,
  python-decorator, python-flask-restful, python-flex,
  python-marshmallow, python-pytest-cov, and python-wheel.

Change-Id: I724855c2cdd22d9d36c0f7716ae183cf3b7db382
 2025-09-25 09:35:52 +01:00
Sharlatan Hellseher
0ac41884fe
gnu: python-dotenv: Update to 1.1.1. 
* gnu/packages/python-xyz.scm (python-dotenv): Update to 1.1.1.
  [build-system]: Use pyproject.
  [arguments]: Drop them.
  [native-inputs]: Remove python-mock; add python-setuptools.

Change-Id: I6dce45f8aabf5dc12f3b37b2d851d910a2786b6b
 2025-09-25 09:35:51 +01:00
Sharlatan Hellseher
d348f3f21f
gnu: python-anyio: Reduce closure size. 
* gnu/packages/python-xyz.scm (python-anyio): Reduce closure size.
  [propagated-inputs]: Remove python-contextvars and
  python-typing-extensions.
  [native-inputs]: Remove python-wheel.

Change-Id: I740b7e3fd1c3b89eb762729e04fe70c71ea50202
 2025-09-25 09:35:50 +01:00
Sharlatan Hellseher
e146256401
gnu: python-sh: Update to 2.2.2. 
* gnu/packages/python-xyz.scm (python-sh): Update to 2.2.2.
  [build-system]: Use pyproject.
  [arguments] <test-flags>: Skip some shaky tests.
  <phases>: Add 'pre-check and use default 'check.
  [native-inputs]: Remove python-coverage; add python-poetry-core and
  python-pytest.

Change-Id: Ibf59528a75ea21a3312b8afa3eece2ef5273de69
 2025-09-25 09:35:50 +01:00
Sharlatan Hellseher
fb8e47c541
gnu: python-async-generator: Switch to pyproject-build-system. 
* gnu/packages/python-xyz.scm (python-async-generator)
  [build-system]: Use pyproject.
  [native-inputs]: Add python-setuptools.

Change-Id: I230bdc35578a03cd1fd5a614ee5b6eb1e659d6f8
 2025-09-25 09:35:50 +01:00
Sharlatan Hellseher
a917cad05d
gnu: python-outcome: Update to 1.3.0.post0. 
* gnu/packages/python-xyz.scm (python-outcome): Update to 1.3.0.post0.
[native-inputs]: Remove python-pytest-cov; add python-setuptools.

Change-Id: I04d1a829ffdee4ada25e70e09308d73b1af073cc
 2025-09-25 09:35:50 +01:00
Sharlatan Hellseher
260269a0d4
gnu: python-pyasn1-modules: Update to 0.4.2. 
* gnu/packages/python-xyz.scm (python-pyasn1-modules): Update to 0.4.2.
  [build-system]: Use pyproject.
  [arguments] <test-backend>: Use unittest.
  [native-inputs]: Add python-setuptools.
  [home-page]: Fix URL as the project has migrated to GitHub.

Change-Id: I9c40854215589fbae87f9f7c44aa5c52e1f47cb9
 2025-09-25 09:35:49 +01:00
Sharlatan Hellseher
e1ee92f30c
gnu: python-importlib-metadata: Update to 8.7.0. 
* gnu/packages/python-xyz.scm (python-importlib-metadata): Update to 8.7.0.
  [build-system]: Use pyproject.
  [arguments]: Drop them.
  [native-inputs]: Remove python-pypa-build and python-pytest; add
  python-jaraco-test, python-packaging-bootstrap,
  python-pytest-bootstrap, and python-setuptools.

Change-Id: I9ba93055061c44999a368d302d439f8123755afa
 2025-09-25 09:35:49 +01:00