Commit graph

169623 commits

Author SHA1 Message Date
Ludovic Courtès
0971788c0b
gnu: guix: Update to 679c9b0.
This is a followup to 6e12325bf3 and
7d1d1d1f7c.

* gnu/packages/package-management.scm (guix): Update to 679c9b0.

Change-Id: I96aa3ab3c0e5a9bdc11157e982815d5cb6816127
2025-09-25 23:23:15 +02:00
Hugo Buddelmeijer
758808cd9d
gnu: python-iterable-io: Fix tests.
* gnu/packages/python-xyz.scm (python-iterable-io): Fix tests.
[native-inputs]: Remove python-wheel; add python-pytest.

Change-Id: I8c525653b8277c39b3a4b74c82c5eb864f9b032d
Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
2025-09-25 13:58:53 -07:00
Hugo Buddelmeijer
7382948978
gnu: python-noiseprotocol: Fix tests.
* gnu/packages/python-web.scm (python-noiseprotocol): Fix tests.
[native-inputs]: Remove python-wheel; add python-pytest.
[source]: Switch to git-fetch to have tests.

Change-Id: I474ef101c1d645dea06c6a953928793d70c7caf2
Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
2025-09-25 13:58:50 -07:00
Nguyễn Gia Phong
679c9b0d8b
gnu: aflplusplus: Update to 4.33c.
* gnu/packages/debug.scm (aflplusplus): Update to 4.33c.

Change-Id: I8b4cd403926ffe9cb39fd340baf341a5b438e39d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2025-09-25 22:04:26 +02:00
pinoaffe
8580847f8a
gnu: Add bookmarkfs.
* gnu/packages/web.scm (bookmarkfs): New variable.

Change-Id: I83cfb30e26c58b258a85d085431eeed128995af9
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2025-09-25 22:04:26 +02:00
Giacomo Leidi
40c2edf91b
build-system: mix: Allow passing test flags.
* guix/build-system/mix.scm (mix-build): Add test-flags keyword
argument and pass it on.
* guix/build/mix-build-system.scm (check): Add test-flags keyword
argument and pass it to Mix.

Change-Id: Ib8243aaaf7a7d02df993cee44f33b36566049e83
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2025-09-25 22:04:26 +02:00
Hugo Buddelmeijer
6e4ac11633
doc: Clarify depth argument of build -P is non-optional.
* doc/guix.texi (Additional Build Options): Depth in guix build -P is required.

Change-Id: I2cbc149a9fc59a198ceedb06cc1fa5496b4f4c91
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2025-09-25 22:04:26 +02:00
Hennadii Stepanov
5e89d39601
gnu: libsecp256k1: Fix cross-compiling.
* gnu/packages/crypto.scm (libsecp256k1)
[source]: Remove snippet deleting "src/precomputed_ecmult.c" and
"src/precomputed_ecmult_gen.c".
[arguments]: Add conditional phase 'delete-precomputed-files' that
deletes them only when not cross-compiling.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2025-09-25 22:04:25 +02:00
Simon Tournier
6e12325bf3
git: Fix update cached checkout when not a symref.
Follow up of 66463356ce.

* guix/git.scm (update-cached-checkout)[symref?]: New procedure.
[ref->refspecs]: New procedure.
Use them.

Change-Id: Ia2cb7db45222d59d61a2349bec277fd06456844b
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Modified-by: Ludovic Courtès <ludo@gnu.org>
2025-09-25 22:04:25 +02:00
Trevor Arjeski
052fab5f0b
gnu: mash: Update to 2.3 and fix build with gcc-14.
* gnu/packages/bioinformatics.scm (mash): Update to 2.3.
[arguments]<#:phases>{fix-includes}: Add file to substitutions.
* gnu/packages/patches/mash-add-missing-headers.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register new file.

Fixes: guix/guix#2986
Change-Id: I6a37a6b65b0abe9b72663bcafbc034dac0cff0c0
Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-25 21:39:21 +02:00
Trevor Arjeski
8c7d8cbd2f
gnu: capnproto: Update to 1.2.0.
* gnu/packages/serialization.scm (capnproto): Update to 1.2.0.
* changed: gnu to cmake build system to get a test to pass (unsure why).
* moved: /tmp dir patch to after 'unpack phase.

Change-Id: I6a27587f8126eeb0cfeb7b9f26dc436bd66b5f92
Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-25 21:20:00 +02:00
Andreas Enge
b97049b29c
gnu: Remove references to (gnu packages fcitx).
This is a follow-up to commit 04a4f8cc9d .

* etc/teams.scm (localization): Unregister removed file.
* CODEOWNERS: Regenerate file.

Change-Id: Id7196e36aab79ecdb65f9e4a1f18e81e92fb6994
2025-09-25 21:11:39 +02:00
Hilton Chain
4a16a264e9
gnu: Remove use of (gnu packages fcitx) module.
Follow-up to module removal in 04a4f8cc9d.

* gnu/packages/freedesktop.scm,
* gnu/packages/telegram.scm: Remove use of (gnu packages fcitx) module.

Change-Id: I36208bf8cb7ccb13bb4e55ec8262a8614adc5f16
2025-09-26 03:02:28 +08:00
Distopico
2ae4c32a74
gnu: direnv: Update to 2.37.1.
* gnu/packages/shellutils.scm (direnv): Update to 2.37.1.

Change-Id: I156b641435b0b0e134e9f4be206daa4275c89d51
Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-25 20:53:40 +02:00
Andreas Enge
04a4f8cc9d
gnu: Remove (gnu packages fcitx).
* gnu/packages/fcitx.scm: Remove file.
* gnu/local.mk (GNU_SYSTEM_MODULES), po/packages/POTFILES.in: Unregister
file.

Fixes: guix/guix#2260
Change-Id: I70cdffb1dc5f8112afbdf556f457d647d788db9e
2025-09-25 20:33:34 +02:00
Andreas Enge
7ed492c5a8
gnu: Remove presage.
* gnu/packages/fcitx.scm (presage): Delete variable.

Change-Id: I37bb83d8c6dcb949103a57827f4cac8a97fab3b1
2025-09-25 20:31:45 +02:00
Andreas Enge
03b630d95b
gnu: Remove maliit-framework.
* gnu/packages/freedesktop.scm (maliit-framework): Delete variable.

Change-Id: Ia8d25c29a86befd5859f39693ed67e659ed1f68d
2025-09-25 20:31:14 +02:00
Andreas Enge
ab26bff569
gnu: Remove maliit-keyboard.
* gnu/packages/freedesktop.scm (maliit-keyboard): Delete variable.

Change-Id: I445aa513f75727c68860547e53d6ef378563d024
2025-09-25 20:29:09 +02:00
Simon Tournier
00799525e7
gnu: Add r-tesseract.
* gnu/packages/cran.scm (r-tesseract): New variable.

Change-Id: Ia4227bee7f02de4901c5a6542b6a3b8c2d880cd8
Signed-off-by: Andreas Enge <andreas@enge.fr>
2025-09-25 20:16:51 +02:00
Hilton Chain
fff8271db4
gnu: emacs-org-rainbow-tags: Update to 0.1-pre-1.dfe3604.
This change also fixes build failure of the package.

* gnu/packages/emacs-xyz.scm (emacs-org-rainbow-tags): Update to
0.1-pre-1.dfe3604.

Change-Id: Ia678db34fa9211ae100416b5e172d2b0dc35851b
2025-09-26 02:10:34 +08:00
Hilton Chain
896872cba8
gnu: python-mpv-jsonipc: Disable tests explicitly.
* gnu/packages/python-xyz.scm (python-mpv-jsonipc) [arguments] <#:tests?>:
Disable.

Change-Id: I921848852c7963951092e9beee0c630d954320b7
2025-09-26 02:06:11 +08:00
jgart
ace78713a9
gnu: trealla: Update to 2.83.8.
* gnu/packages/prolog.scm (trealla): Update to 2.83.8.

Change-Id: I190612b48e6a69e31384bb12d81465a668f2de59
2025-09-25 10:55:50 -05:00
Baptiste Strazzulla
29d364498e
gnu: git-lfs: Fix build.
This change is to bypass combination of go-build-system and custom make
targets where the import path is set manually, see discussion in
guix/guix#2133.

* gnu/packages/version-control.scm (git-lfs): Rename binary and home page

Change-Id: Ic87627412f715ebed07cf79ddd298e777746975f
Reviewed-by: Nicolas Graves <ngraves@ngraves.fr>
Reviewed-by: Maxim Cournoyer <maxim@guixotic.coop>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 16:39:34 +01:00
Janneke Nieuwenhuizen
58b6dc4d55
gnu: guile-emacs: Fix build with gcc-14.
* gnu/packages/guile.scm (guile-for-guile-emacs)[arguments]: Replace
emacs-minimal's CFLAGS in #:configure-flags with specific and extra flags to
relax gcc-14's strictness.

Change-Id: I6b3f871695eb25fbf84a2334525e1d0e15e36b92
2025-09-25 16:25:59 +02:00
Sharlatan Hellseher
3755088384
gnu: Add python-six-bootstrap.
* gnu/packages/python-xyz.scm (python-six-bootstrap): New variable.

Fixes: guix-science/guix-past#20.
Reported-by: @gabor-udvari
Change-Id: I15b993e39c76dd39d1871179fc899e963d411d45
2025-09-25 12:37:56 +01:00
Sharlatan Hellseher
1b1db5f79f
gnu: mallard-ducktype: Move to documentation.
* gnu/packages/python-xyz.scm (mallard-ducktype): Move from here ...
* gnu/packages/documentation.scm: ... to here.

Fixes: guix/guix#1200.
Change-Id: I05895a56626a0416c4c7710c48f06b62538b4622
2025-09-25 12:36:52 +01:00
Efraim Flashner
e5d2f0bd4b
gnu: toot: Update to 0.50.1.
* gnu/packages/fediverse.scm (toot): Update to 0.50.1.
[arguments]: Remove field.
[inputs]: Remove python-urwid and python-urwidgets; add python-dateutil
and python-urwid-3.
[native-inputs]: Remove python-psycopg2-binary, python-pyyaml, and
python-typing-extensions; add python-pillow and python-setuptools-scm.

Change-Id: I06a39646b1ffac130a42a1d1d10bbdcfc625ab94
2025-09-25 13:53:01 +03:00
Arun Isaac
7b8ef76b0f
services: mumi: Raise maximum duration of indexing job.
Indexing all Debbugs issues from scratch can take more than an hour.

* gnu/services/web.scm (mumi-shepherd-services): Raise #:max-duration to 2
hours.
2025-09-25 11:37:06 +01:00
Efraim Flashner
2c7e5574a9
gnu: dbxfs: Fix build.
* gnu/packages/file-systems.scm (dbxfs)[build-system]: Switch to the
pyproject-build-system.
[native-inputs]: Add python-setuptools.

Change-Id: I79dfd9e7092aaf0b5078900c6b2ecbbe9137b44f
2025-09-25 13:07:56 +03:00
Douglas Deslauriers
6b8c23fd7f
gnu: vmware-open-vm-tools: Update to 13.0.0.
* gnu/packages/virtualization.scm (vmware-open-vm-tools): Update to
 13.0.0.

Change-Id: I503b9202db82992442a76af3c6b2ce8ffe017e4a
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 10:45:40 +01:00
Oscar Chevalier
2738209b5d
gnu: neovim: Add support for guix neovim packages.
Enables the use of guix as a package manager for neovim, compatible with
the outputs of `vim-build-system`.

* gnu/packages/vim.scm (neovim)[arguments]: Added another phase to
install the system init file to the correct place.
* gnu/packages/aux-files/guix-nvim.vim: New file.
* Makefile.am (AUX_FILES): Register file.

Change-Id: I375e3e0d051da27d065dff5456cb298a01bc90b1
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2025-09-25 12:38:47 +03:00
Rutherther
80f24100f6
teams: Add entry for Rutherther.
Add myself to release team.

* etc/teams.scm (Rutherther): New member.

Change-Id: Ied242919f54abe05e429fb8e658bdc9e0ffc0cb1
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2025-09-25 11:57:49 +03:00
Sharlatan Hellseher
ea44a564d1
gnu: python-quadpy: Adjust inputs.
* gnu/packages/maths.scm (python-quadpy)[inputs]: Add python-matplotlib.
[native-inputs]: Remove python-wheel.

Change-Id: I72f2d7daafebd98f96245697aecb60c176981336
2025-09-25 09:37:04 +01:00
Sharlatan Hellseher
f94377da73
gnu: python-scikit-fem: Update to 11.0.0.
* gnu/packages/python-science.scm (python-scikit-fem): Update to 11.0.0.
[propagated-inputs]: Add python-matplotlib.
[native-inputs]: Remove python-wheel.

Change-Id: I52ac1f1125f7d5849b8a90f5db74aeabc08fd6ef
2025-09-25 09:37:04 +01:00
Sharlatan Hellseher
34a80a0f72
gnu: python-plotly: Fix tests.
* gnu/packages/python-science.scm (python-plotly) [native-inputs]:
Remove python-wheel; add python-nbformat.

Change-Id: I257a9b06343b37e95428bfa46f4b5547b7adb876
2025-09-25 09:37:03 +01:00
Sharlatan Hellseher
60e0723b09
gnu: python-textdistance: Limit concurrent tests.
* gnu/packages/python-xyz.scm (python-textdistance)[arguments]
<test-flags>: Limit parallel tests up to 4 threads.

Change-Id: Id70320f528a0618e3058ccabaec5675180b06b74
2025-09-25 09:37:03 +01:00
Sharlatan Hellseher
fe84590b09
gnu: python-poppy: Fix tests.
* gnu/packages/astronomy.scm (python-poppy)[arguments] <test-flags>:
Avoid "docs/ext/numfig.py".

Change-Id: If0ab442d6e5ab93ef59f602be4fa3cf37ce23422
2025-09-25 09:37:03 +01:00
Nicolas Graves
0b1bb5d68c
gnu: python-pygtrie: Fix and run tests.
* gnu/packages/python-xyz.scm (python-pygtrie)
[source]: Switch to git-fetch.
[arguments]<#:test-backend>: Set it.
<#:phases>: Add phase 'set-version.
[native-inputs]: Remove python-wheel.

Change-Id: Ib3da3430340077624410e334d7846b75b6928471
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:03 +01:00
Nicolas Graves
bdf0b56b85
gnu: python-distance: Update to 0.1.3-0.ad7f9dc.
* gnu/packages/python-xyz.scm (python-distance): Update to 0.1.3-0.ad7f9dc.
[source]: Switch to git-fetch.
[arguments]: Set <#:test-backend> and <#:test-flags>.
[native-inputs]: Remove python-wheel.

Change-Id: I76fdce7caa7cff779ef6df60dd3969aea57be5d5
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:03 +01:00
Nicolas Graves
f9fc9c1d4e
gnu: python-pyxdameraulevenshtein: Run and fix tests.
* gnu/packages/python-xyz.scm (python-pyxdameraulevenshtein)
[source]: Switch to git-fetch.
[native-inputs]: Add python-pytest, remove python-wheel.

Change-Id: I5835d0367438a3f3cc017b1dc37fd5d6f2f3c120
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:03 +01:00
Nicolas Graves
53aa7a1585
gnu: python-matrix-nio: Disable failing tests.
* gnu/packages/matrix.scm (python-matrix-nio)
[arguments]<#:test-flags>: Disable failing tests.
<#:phases>: Improve style ; add phase 'relax-requirements.
[native-inputs]: Remove python-mypy, python-mypy-extensions,
python-poetry-core, python-pytest-cov, python-pytest-flake8,
python-wheel.

Change-Id: I45ddc6ca02333eb5384f310cfd6cdb9091626334
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:03 +01:00
Nicolas Graves
cae5f4fb3f
gnu: python-vireosnp: Update to 0.5.9-0.e365463.
* gnu/packages/bioinformatics.scm (python-vireosnp): Update to 0.5.9-0.e365463.
[source]: Switch to git-fetch.
[arguments]<#:phases>: Replace 'check phase.
[native-inputs]: Remove python-wheel.

Change-Id: I53fee681916b4c4a5ad483fdf589e8297864da7f
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:03 +01:00
Nicolas Graves
3a98b3f41a
gnu: python-telingo: Fix tests.
* gnu/packages/potassco.scm (python-telingo)
[source]: Run guix style.
[native-inputs]: Add python-pytest, remove python-wheel.

Change-Id: Ie20e81780ac715f63fb4485e19a5e28b5a7ef579
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:02 +01:00
Nicolas Graves
cf67c48303
gnu: python-shopifyapi: Switch to pyproject.
* gnu/packages/python-web.scm (python-shopifyapi):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-setuptools-next.
[description]: Improve style.

Change-Id: If574f434dc796c26f07f93f60157bea5a2ac9aaf
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:02 +01:00
Nicolas Graves
16ff95c3c8
gnu: python-test-utils: Disable tests.
* gnu/packages/python-check.scm (python-test-utils)
[arguments]<#:tests?>: Disable them.
[native-inputs]: Remove python-wheel.

Change-Id: Ib45a88ef010749f5b18f0ae591df83baf99c5bc6
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:02 +01:00
Nicolas Graves
a9528887ad
gnu: python-sshtunnel: Slim down patch.
* gnu/packages/patches/python-sshtunnel-pep518.patch: Remove uneeded
patch content.

Change-Id: Iaf97a87b855ab1b18721d5464e4cd2494c5040a0
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:02 +01:00
Sharlatan Hellseher
6e1adfa021
gnu: python-cobaya: Fix build.
* gnu/packages/astronomy.scm (python-cobaya)[propagated-inputs]: Add
python-requests.
[native-inputs]: Remove python-wheel.

Change-Id: I029e69a6a4a9933191ee4b9e71f3af94c68bff2d
2025-09-25 09:37:02 +01:00
Hugo Buddelmeijer
b76bf5dcd1
gnu: python-scipy: Reduce closure size.
As documentation was not built at all, this change removes everything
requiring for to reduce the closue size.

* gnu/packages/python-science.scm (python-scipy): Adjust inputs
[arguments] <phases>: Remove 'install-doc.
[propagated-inputs]: Keep only python-numpy.
[native-inpusts]: Remove python-hypothesis, and python-pytest-cov; add
python-mpmath, python-numpydoc, python-pythran, python-rich-click,
python-threadpoolctl, and python-typing-extensions.

Fixes: guix/guix#2944.
Change-Id: I97e4914c3d705b47b276d3f88dc938f26b0d27a5
Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2025-09-25 09:37:02 +01:00
Sharlatan Hellseher
08e6a0faba
gnu: ringdecomposerlib: Fix tests.
* gnu/packages/chemistry.scm (ringdecomposerlib)[native-inputs]: Remove
python-cython; add python-cython-0.

Change-Id: Ia63a5bcbc9c1e446cc96948e52645ddfe9e31bb6
2025-09-25 09:37:02 +01:00
Sharlatan Hellseher
90fd44072d
gnu: python-scikit-opt: Fix tests.
* gnu/packages/python-science.scm (python-scikit-opt)[native-inputs]:
Add python-pytest.

Change-Id: I55b2659c9b897ed170c12c9407d9828f469393c6
2025-09-25 09:37:02 +01:00