Commit graph

7958 commits

Author SHA1 Message Date
Ricardo Wurmus
00048cdb28
gnu: r-badregionfinder: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-badregionfinder): Update to 1.36.0.

Change-Id: Ibbe72bb3b7868b6cd7c16a64ff1e0979eab3638f
2025-05-12 08:54:22 +02:00
Ricardo Wurmus
81f3ef3289
gnu: r-bader: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-bader): Update to 1.46.0.

Change-Id: I82801d2389eb3e4e92e357b90b6675cb6f6e5b2d
2025-05-12 08:54:22 +02:00
Ricardo Wurmus
07fd5200f6
gnu: r-bags: Update to 2.48.0.
* gnu/packages/bioconductor.scm (r-bags): Update to 2.48.0.

Change-Id: I9c60d15e06f27423ef916d777a7976b950f6f89a
2025-05-12 08:54:22 +02:00
Ricardo Wurmus
679bebac9a
gnu: r-baalchip: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-baalchip): Update to 1.34.0.
[native-inputs]: Add r-biocgenerics.

Change-Id: I6c61a9f26964bad0d8f2540ee0e4a07b338fb31b
2025-05-12 08:54:22 +02:00
Ricardo Wurmus
35e5c6af4b
gnu: r-awst: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-awst): Update to 1.16.0.

Change-Id: I98723afb9d313cb20f0c07378c9faa2a7ccbdcc2
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
49d2fd16d6
gnu: r-awfisher: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-awfisher): Update to 1.22.0.

Change-Id: Ic68f0d96276b1b5b67685b493a86a24652976af8
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
e517c883b8
gnu: r-attract: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-attract): Update to 1.60.0.

Change-Id: Iffcca3b11ca28e1e35ec54cc6807437399010ee7
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
fbc9edab19
gnu: r-atsnp: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-atsnp): Update to 1.24.0.
[native-inputs]: Remove r-testthat.

Change-Id: I5425cc1ba4103e03e4aecf0ea398d9551201549c
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
2f99ca1cec
gnu: r-atena: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-atena): Update to 1.14.0.

Change-Id: I5c8118fa6b9f82831e085cda4a34dcf57e77630d
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
4ba78d80d8
gnu: r-assorthead: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-assorthead): Update to 1.2.0.

Change-Id: Id0840fe619c569cd07005c02267819b6f3108aaf
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
d2bbdd4324
gnu: r-asset: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-asset): Update to 2.26.0.

Change-Id: I25eccac2c8e38d73d9a2fd610dd3792ee4e5e340
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
58c1e71a1a
gnu: r-assessorf: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-assessorf): Update to 1.26.0.

Change-Id: I2d320041eff72d8de07e5f1e8bac7f1214686634
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
c1a454afb4
gnu: r-aspli: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-aspli): Update to 2.18.0.

Change-Id: Ied780f1885c4ee91315cdd40d4d4a4280836ecca
2025-05-12 08:54:21 +02:00
Ricardo Wurmus
1f855f279d
gnu: r-asics: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-asics): Update to 2.24.0.

Change-Id: I0d15d30dcf26baa3c2117c0afe15bca9f0c7ba6c
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
7d5b34ba71
gnu: r-asgsca: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-asgsca): Update to 1.42.0.

Change-Id: I90c62b6c8cf2ed403986f6c76570aaf8784cbc79
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
ca7d8a2c75
gnu: r-aseb: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-aseb): Update to 1.52.0.

Change-Id: I24bdae5f5ab8b9eed4df0ddbc2a57ffcd516a079
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
410c5ab638
gnu: r-asafe: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-asafe): Update to 1.34.0.

Change-Id: I30d62f866ff2598ddcea646397a8e678f34cb737
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
e70fc3f94b
gnu: r-arrayquality: Update to 1.86.0.
* gnu/packages/bioconductor.scm (r-arrayquality): Update to 1.86.0.

Change-Id: I126b62c42c1a4e2b9e1d2560fb3685e4b710a5ba
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
0385c244c4
gnu: r-arraymvout: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-arraymvout): Update to 1.66.0.

Change-Id: I6f8d67a535f2d4cc5b19b674a5d0c5d62f032bdb
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
837a67135f
gnu: r-arrayexpress: Update to 1.67.1.
* gnu/packages/bioconductor.scm (r-arrayexpress): Update to 1.67.1.

Change-Id: I24c5ea596b95dacd7cddb8c1250abbf66ae9ef22
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
88b824191e
gnu: r-antiprofiles: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-antiprofiles): Update to 1.48.0.

Change-Id: Icd16775bf57c2ec783b4e72a08138c966da48962
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
5d52abfed6
gnu: r-aneufinder: Update to 1.35.0.
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.35.0.
[native-inputs]: Add r-bsgenome-hsapiens-ucsc-hg19.

Change-Id: I0b41b8e97829a5a27f8bee98317db8be6cc526e7
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
2f3560bbfc
gnu: r-altcdfenvs: Update to 2.70.0.
* gnu/packages/bioconductor.scm (r-altcdfenvs): Update to 2.70.0.

Change-Id: Ie84347eefe5046d0ec1d87257a84712c3fe7e44d
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
0fbc5346f8
gnu: r-alphabeta: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.22.0.

Change-Id: I8b4108e5f7a6897b0e738317e9ea023e0ea54f22
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
e6b3a92d10
gnu: r-alevinqc: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.24.0.
[properties]: Remove updater-extra-native-inputs.

Change-Id: Iaced4c394b86972a7e73686437df635da037dea5
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
2a2eefd95b
gnu: r-aldex2: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-aldex2): Update to 1.40.0.

Change-Id: Iac30b14e7f9e920f2e84a9dd79e894c0fd1026ce
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
04878d2cf5
gnu: r-anvilgcp: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-anvilgcp): Update to 1.2.0.

Change-Id: I89f623a55cdf5c72aed3f8d76b8302a4b36f1960
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
5a08ce4df0
gnu: r-anvilbase: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-anvilbase): Update to 1.2.0.

Change-Id: I90b4551caa8cd68626198869cbee05ee95e537ad
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
d0a04764d9
gnu: r-annotationhubdata: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-annotationhubdata): Update to 1.38.0.

Change-Id: Ica7cb350b027318c3fe55ed21c1e530327fbd991
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
f8fe988db9
gnu: r-animalcules: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.24.0.

Change-Id: If6fc4b4d831a2832215cf5d24dde1e7da906125f
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
7eec7b4f4c
gnu: r-ancombc: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.10.0.

Change-Id: I501a00e3edc050bded31973d0c2a1a7796e4170d
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
be8b2a5df9
gnu: r-anaquin: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-anaquin): Update to 2.32.0.

Change-Id: Icc41e23e97d590b359bb30cac5739ab5ec0bff21
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
f0f6c7eac4
gnu: r-amaretto: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.24.0.

Change-Id: I475839af8f2337663bc39d8c1e6709b56806fd30
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
e84d384b69
gnu: r-amplican: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-amplican): Update to 1.30.0.
[native-inputs]: Add r-devtools.

Change-Id: I52a340216ca0cea94e8e2d50ed0c34e1397399e6
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
b3d96d305c
gnu: r-amountain: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-amountain): Update to 1.34.0.

Change-Id: I1d35f988f6901b783287fa3645b5c6cfc81f3f03
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
84ab6c7deb
gnu: r-airpart: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-airpart): Update to 1.16.0.

Change-Id: I628b3ac172bbdb497d2e59f1901e2d90857c7a31
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
3a7ddacde8
gnu: r-aims: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-aims): Update to 1.40.0.
[native-inputs]: Add r-biocgenerics.

Change-Id: I22a367ac788564851fdaf35d031403c5e3410882
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
3f0d0f744d
gnu: r-agimicrorna: Update to 2.58.0.
* gnu/packages/bioconductor.scm (r-agimicrorna): Update to 2.58.0.

Change-Id: Ic8aa960b3d6468a34d8170b8cfd90c0b8176ab14
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
6a2aaa3325
gnu: r-adductomicsr: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-adductomicsr): Update to 1.24.0.

Change-Id: I1d43f2db5a3c05f04de95e02cad94016694ead0d
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
c95458bfc4
gnu: r-agilp: Update to 3.40.0.
* gnu/packages/bioconductor.scm (r-agilp): Update to 3.40.0.

Change-Id: I69282cc34f8b0fe0255f22b243e3748aa41f0b7a
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
3de13ac0f0
gnu: r-aggregatebiovar: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-aggregatebiovar): Update to 1.18.0.

Change-Id: I2ca20b01c20640e8a4be603e19210cc6423fc784
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
6d6c003220
gnu: r-agdex: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-agdex): Update to 1.56.0.

Change-Id: Ic61f70fc91dd0e7c706c901b6494cd695a600fdf
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
0ed7d75df0
gnu: r-affyrnadegradation: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-affyrnadegradation): Update to 1.54.0.

Change-Id: I65911302a5ffda7e95551f8a48fa9f4196f8b609
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
0232c88926
gnu: r-affylmgui: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-affylmgui): Update to 1.82.0.

Change-Id: Idd8b20f149ef434f1a8b817c16a0d09e60acc190
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
1eb6254aa8
gnu: r-affyilm: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-affyilm): Update to 1.60.0.

Change-Id: I935453de3be42ad9bb3cdb4e1b13d0cc8e2cc954
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
37c4cb20df
gnu: r-affixcan: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-affixcan): Update to 1.26.0.

Change-Id: Idc7dba98db54145e0a6a40804307457f1ed5da87
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
3763895c53
gnu: r-adsplit: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-adsplit): Update to 1.78.0.

Change-Id: I84bfa8bfd1252ed9dd4cd1e443e012c5bfbb2b2a
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
5204cbd080
gnu: r-adimpute: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-adimpute): Update to 1.18.0.

Change-Id: I165d7e8675de8a807ff0e05d1e1f8e7a14ed2888
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
24e54ef574
gnu: r-adam: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-adam): Update to 1.24.0.

Change-Id: Ie8e91599088c3360912b946c20e8d0a030e70ae8
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
6a2abc4a22
gnu: r-adacgh2: Update to 2.48.0.
* gnu/packages/bioconductor.scm (r-adacgh2): Update to 2.48.0.
[propagated-inputs]: Remove r-glad.

Change-Id: Id54bd6c3c41102459d86be76b935af818c9adb46
2025-05-12 08:54:16 +02:00